Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0099 ATGAAACCCTCTATCTTAGCCTTTCTCTTATTATCATCACTGGTTTTGCAAGTAACTACTTGCTTCCAGCATCATATTCCAATATCTCAGCTAAGGAACACGCTTGAGAAAAAACTAATCACTGTCCTTTCAAACTCACCACCTTTATTAGCATCATCACCAGCACCTTCAGAAGCAAAAAGGAGTGTTGGAGTGGTGTACCCAGCTGGGTATGGTGCTGACCCTACAGGGAAAAATGATAGTAGTGATGCAATTCTGAATGCTATAGGAGATGCTTTTAAGACCGAGAGTGGGTTAGAGTTGATGCCAGGAGTTAAAGACCTTGGTGGTGTTGTGATTGATTTGCAAGGTGGAAACTACAAAATCAGCAAACCCATCACATTTCCTTCTTCTGGTGGTGGTAATGTTGTGGTAAAAGGAGGAACCTTGAGAGCTTCTGATTCATTCCCATCTGATCGCTATCTTATTGAGTTAATAGCATCAACAACCACACCTCAACAAAATAATGTAGTTCATTACGAAGACATAACATTCCATGACATCCTCTTCGATTCGAGCTACAAAGGTGGAGGGATTTCCATTGTTGATTCAGCTAGAATCAGGATCAACAATTGCTTCTTCCTCCATTTCGAAACCGAAGGAATTCTTGTCCAACGCGGCCATGAGACCTTCATATCTAGTTCTTTCCTTGGACAACACTCAACGGTGGGCGGCGACAAAGGGGAGAGGAATTTCACAGGCACTGCCATTGATCTCGCGAGCAATGACAATGCAATCACAGATGTCGCAATTTTCTCGGCTGCCATTGGTATTCTTCTAAGGGGACAAGCTAACATTATTACTGGTGTGCATTGTTATAATAAGGCCACAGGTTTTGGTGGCATTGGCATTTTGGTGAAGTTACCAGGAAATTCAGCAACTAGAATTGACAATTGTTACATGGACTATAATGCCATAGTCTTGGAAGATCCGACTCAAGTTCATGTCACTAATGCATTTTTCTTAGGGGATGGTAATATTGTTTTGAAGTCAATTAATGGACAAATTTCTGGTTTAACTATAGTTGATAATATGTTCAGTGGGGACCCTAAAGCTAAGTTCCCAATTATAAGTCTAGATGGGAAATTCAGTAACATTGATCAAGTGGTTATTGATAGGAACATTGTTGCTGGTATGAGCATCAAATCAACTATTGGGAAATTAAATATGGATGGAAATGGCACAAAATGGGTGGCTGATTTTTCTAACATTTTGGTATTCCCTAATAGGATTAGTCATTTTCAGTATTCATTTTTCTCTCAAGAGGGGCCTAAATTTATAGCACATTCAGTGACCAATGTGTCAAATAATATTGTAGTTGTGGAAAGTGAAAAGCCAGTTAAAGGGGTTGTTTCCTTCTTAGTTGAACAATGA 1413 0.397 MKPSILAFLLLSSLVLQVTTCFQHHIPISQLRNTLEKKLITVLSNSPPLLASSPAPSEAKRSVGVVYPAGYGADPTGKNDSSDAILNAIGDAFKTESGLELMPGVKDLGGVVIDLQGGNYKISKPITFPSSGGGNVVVKGGTLRASDSFPSDRYLIELIASTTTPQQNNVVHYEDITFHDILFDSSYKGGGISIVDSARIRINNCFFLHFETEGILVQRGHETFISSSFLGQHSTVGGDKGERNFTGTAIDLASNDNAITDVAIFSAAIGILLRGQANIITGVHCYNKATGFGGIGILVKLPGNSATRIDNCYMDYNAIVLEDPTQVHVTNAFFLGDGNIVLKSINGQISGLTIVDNMFSGDPKAKFPIISLDGKFSNIDQVVIDRNIVAGMSIKSTIGKLNMDGNGTKWVADFSNILVFPNRISHFQYSFFSQEGPKFIAHSVTNVSNNIVVVESEKPVKGVVSFLVEQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0099 470 Gene3D - 70 461 IPR012334 -
Lan4g0099 470 SUPERFAMILY Pectin lyase-like 64 427 IPR011050 -
Lan4g0099 470 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 4 470 - -
Lan4g0099 470 PANTHER POLYGALACTURONASE QRT3 4 470 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0099 Lan-Chr4 1426411 1429938 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0099 - - gmx:100802482 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0099 4 1426411 1429938 Lan19g0837 19 14894930 14897047 LSH