Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0086 ATGGTTCGAATCCCATTGGACTCAACAAATGGTACACAAGATGATTTGAATGGTTTTAGGTTTTCTCTTGATCAAATTGTCACCAAAGTTAACAAGCTTGAGAATCAAGTAAATGATGTTGAACAATTCTACCATTCCATCGATGTTCAAGTTAATAATTCTAAAGAGAAAGGCCGGGAAAAGCATCTTTCTGGCACTAAAAAGCCACTGCAAGGTGCATCATGTAGTGGAGCTGTTGCTGCTGCTGCTGCTACAGCAAAAAGAAATAACCAAGAGCTCATGCGCCAGTTTTCCACAATATTGAATCAGATCACCATGCATGAATGGGCATGGCCCTTTATGGATCCTGTAGATGTTGAAGGCCTTGGACTGCATGACTACTATGAGGTTATTGATAAGCCTATGGATTTCAGTACAATAAGAAGTAAAATGGCTGCTAAGGATGGCTCTGGTTATAAGAATGTCAGGGAGATTTATACTGATGTAAGGTTGATTTTTAACAATGCAATGAAATACAATGATAAGAAACACAATATCCATAATATGGCTAAGACCTTGCTGAAAAAATTTGAGGAGAAATGGTTGGAGCTTTGGCCTAAAGTTGATAAAGAGGAGAAGAGACAATTAGCAGAAGAAGCACAGCTGCAGTTGAATATGCAGCTTGCTCAAGAAGCCACTTATGCCAATATGGCTAGGAACTTAAGTGTTTCGCTACATGAGGTTGATATGCAGTTAGAGAGTCTCAAAGCATTGGTGATTCAAAAGTGCAGGAAACTGTCAGATTATGAGAAAACAATGCTTGGGAATGCTCTCCCTATGTTGTCTCCGGAAAACCTCGTCAAGGCATTGCAGATAGTTTCTGAGAATAACCCTGCCTTCCAACCTAATACATTAGAGGTGGACCTTGACATTGATGCTCAGAGCGACTACACAATGTGGAGGTTAAACGTTTTCGTAAAAGATGCACTAGAAGCTCAGGGAAGAACTGCAGAGGGAACAGCTGTTAACCATGACAATGGTGCTGATGACCATAACAATTCCAAAAGGAGGAGAATTTCGTGA 1062 0.403 MVRIPLDSTNGTQDDLNGFRFSLDQIVTKVNKLENQVNDVEQFYHSIDVQVNNSKEKGREKHLSGTKKPLQGASCSGAVAAAAATAKRNNQELMRQFSTILNQITMHEWAWPFMDPVDVEGLGLHDYYEVIDKPMDFSTIRSKMAAKDGSGYKNVREIYTDVRLIFNNAMKYNDKKHNIHNMAKTLLKKFEEKWLELWPKVDKEEKRQLAEEAQLQLNMQLAQEATYANMARNLSVSLHEVDMQLESLKALVIQKCRKLSDYEKTMLGNALPMLSPENLVKALQIVSENNPAFQPNTLEVDLDIDAQSDYTMWRLNVFVKDALEAQGRTAEGTAVNHDNGADDHNNSKRRRIS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0086 353 PANTHER OSJNBA0053K19.4 PROTEIN 9 350 - -
Lan4g0086 353 Gene3D - 253 329 IPR038336 -
Lan4g0086 353 MobiDBLite consensus disorder prediction 337 353 - -
Lan4g0086 353 SMART bromo_6 86 199 IPR001487 GO:0005515
Lan4g0086 353 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 9 350 IPR017413 GO:0005634|GO:0006355
Lan4g0086 353 Pfam Bromodomain extra-terminal - transcription regulation 259 321 IPR027353 -
Lan4g0086 353 ProSiteProfiles NET domain profile. 249 330 IPR027353 -
Lan4g0086 353 Coils Coil 203 223 - -
Lan4g0086 353 PRINTS Bromodomain signature 108 121 IPR001487 GO:0005515
Lan4g0086 353 PRINTS Bromodomain signature 124 140 IPR001487 GO:0005515
Lan4g0086 353 PRINTS Bromodomain signature 161 180 IPR001487 GO:0005515
Lan4g0086 353 Coils Coil 23 43 - -
Lan4g0086 353 Gene3D - 75 212 IPR036427 GO:0005515
Lan4g0086 353 Pfam Bromodomain 98 184 IPR001487 GO:0005515
Lan4g0086 353 ProSiteProfiles Bromodomain profile. 105 180 IPR001487 GO:0005515
Lan4g0086 353 MobiDBLite consensus disorder prediction 329 353 - -
Lan4g0086 353 SUPERFAMILY Bromodomain 87 202 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0086 Lan-Chr4 1170515 1175980 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0086 - - gmx:100818490 415.616