Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0083 ATGGCTCCTGTACCCATTTCTCTCATCAACGTTGGCCATATTGATGATGTCCAAGAACTAAGGAAAACTAAGCCAAAGACAATTCCTCAAAGATTTGTAAGACACATGACAGAAAGACCAACACTTGTTACATCAGTATCACAACACAACAGTGACATGCCAGTCATTGATTTCTCTAAGCTTAGCAAAGGTAACAAAGAGGAAGTTCTCACTGAACTTTTCAACCTTGCAACTGCTTGTGAGGAGTGGGGATTTTTTCAGGTAATTAATCATGAGGTGGACCTCAATTTGCTGGAGAGTATAGAGAAGATTAGCAAGGATTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATATCAAATGGTTCCAGGTACAGTACAAGGGTATGGACAAGCTTTTGTTTTCTCAGAGGACCAGAAGTTGGACTGGTGCAACATGTTTGCTCTTGGAATTGAACCTAACTATATGAGGAGTCCAAATCTATGGCCGAAGAGACCAGAAAAATTTAGTGAAACAGTGGAAGTGTACTCAAGAGAAGTAAGGAAATTATGCAAGAATCTGCTGAAATACATAGGTCTAGGTCTAGAGTTGGAAGGGGATGCATTTGAGAAGATTTTTGGTGGGGCAGTACAAGCAATGAGGATGAATTACTACCCACCATGTTCAAGACCTGACCTTGTGTTGGGTCTTAGCCCTCATTCAGATGGAAGTGCCCTTACTGTGCTGCAGCAAGCAAAAGGAAGCCCAGTGGGACTTCAAATACTCAAGGACAGTAAATGGGTTCCTGTTCAACCAATTCCAAATGCTCTTGTCATCAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTAATAAAGAGAAAGATAGACTATCAATTGTGACATTTTATGCTCCAAGCTATGAAGTAGAGCTTGGTCCAATGCAGGAATTTATAGATGAAAACCATCCATGCAAGTATAGAAGATACAACCATGGAGAGTACAGCAAGCACTATGTAACAAACAAGTTGCAAGGAAAAAAGACCTTAGACTTTGCCAGAATCCAAACCAAAAACACAAAGTAG 1098 0.4026 MAPVPISLINVGHIDDVQELRKTKPKTIPQRFVRHMTERPTLVTSVSQHNSDMPVIDFSKLSKGNKEEVLTELFNLATACEEWGFFQVINHEVDLNLLESIEKISKDFFMLPLEEKQKYQMVPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPNYMRSPNLWPKRPEKFSETVEVYSREVRKLCKNLLKYIGLGLELEGDAFEKIFGGAVQAMRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGSPVGLQILKDSKWVPVQPIPNALVINIGDTIEVLTNGKYKSVEHRAVANKEKDRLSIVTFYAPSYEVELGPMQEFIDENHPCKYRRYNHGEYSKHYVTNKLQGKKTLDFARIQTKNTK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0083 365 PANTHER PROTEIN SRG1 10 362 - -
Lan4g0083 365 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 362 - -
Lan4g0083 365 Gene3D - 12 351 IPR027443 -
Lan4g0083 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 164 IPR026992 -
Lan4g0083 365 SUPERFAMILY Clavaminate synthase-like 15 351 - -
Lan4g0083 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 310 IPR005123 -
Lan4g0083 365 Pfam 2OG-Fe(II) oxygenase superfamily 211 310 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0083 Lan-Chr4 1134063 1136202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0083 17 359 Glycosyltransferase AT5G59530 35.211 6.81e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0083 - - gmx:100785152 650.973