Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0076 ATGTTAGACCTCAAATATATGTGGGTGTTAATTTCAATCAATAGGTACATAGTTGACACATTAGAAAATGAGAAAACAAGGAGTACTTTAAAACTTAGATGTACCTCAAAGTTAAGGATTCAAAGGCAAGAATTCTTTGAATTGTCTGAGCAATCAGTGCTATCAAATCTTTATTGGGGTATTGACAGCATTGAAGCTGCAATTCAAGCACAGCAGCCAGAAGAAAAATCCTTTAGGCTAATGAATTCAGAACAAATGCTTCAGGTTCCAGCCATGCTCGATGAGGAAGAGGTCACGGCTACGGTTTCGAATCGATATTTGGTATGCTGCTCATATTTTTACCTGTCTGTGGTTAGGAATCTCCAGGGAGATGAATGGCAGGCAGCACTGCATTTTCTTCAAGCAGTATTGGTCTCTCCGAAACTTGTTCGGACAGAATTTGCATCACAAATTTGTGATAGTCTTTTTCACAATGGCAGTAGAAGTTTGGAACATGTTTCTGCTATAACTTCCGAGGATGATATCGATGAATCTGTTAGGGAGATGGCAAGAAGATACAAGGAATGTTTGCTGTATTATAAGGTCATGCTTTATGGAGAGATACCATGGTGGCGCAGTTATTGCTCAAAACAATCAGCTAATACCATGGATGCATCGAATACTAGCTGTGTATCTACTACTTCAGTTCAAAATGAACCAAGATCGCAACCTAGTAATATGGTTCATCCACTTGATCCTGAAGATATGATGCATAAAATGGAACAAGAGTCAAAACGATTCATGGATGCAGCTAAATATAAAGATCACATGGAATCCCTCAGCAAAGAGCATCAAATAATTTCAAGCATCAAATCCTTCAGGAATACATTGAAAGAAGCACAGTCAAAAACACCAACATCAATAGATTCATTTAGAGACGAAATGGACTCGGAAAATATGGATGACAGAGAATTTCATGAAAGAACCAGAATAACAAAAGCAGATGATCTAGTCCATGAAACATACGACTGGAATCTGAATCAATGCATTGATTTGCCTCAAACTCCTCAATATACAATGCAAGAACAGATCAATGACAGAAAAATGGTTAATTTCGGTTCTAGCAGATTCATCAGGTCCATAGAAGATGTCACTTTATCTATCTCAAATTACATAGCTAAAACAAGAAATCCCAACTTAAATTACCATGCAGAAGAGTTAATTGAGGAAGCACCAAAGTCAATAAAATTTCATCTCTTTGATCCATATGCTTGCAAACATAGGCCCAGCCAGAAAAATTATGAAGAATGTTCTTATATGAAATTGCCAAGATCATCATCTATCATAGGAAACTTCGATGAAGTTTCTTCACACTCCGGAAGATATTCTGTGCATGAGTTTTCAGAACTTATTGAAAGAGAAAGTTCAGAACTTATTGAAAGAGAAAGTTCAGAACTACATTATTCAAAGGCATTAGGAAAATGTGGTGAAGAATACACAGTAGACACTGCATCCATTTATGAGTGTTTGACTAGTTCATCAGGCAATACTTATGCTTCCTTAAAGGATGTGCTTTTGGATGAACTGCTAATAGTCATCTCTACTTCTAAAGAGGAACGAGAAATAAGGGCATCAGTATCGACTTTGACAACAATAATTTCAAGGAACAAGTCGGTCATAGAAGACATCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTCATCTATTTAATAAATCCATCTCCTATAGATATAAAAACATTGGAACTTCTGCCAGTACTAGTAGAAATTGTATGCACTTCACGTAGTCGCGAGAGTAAGCAAGAGTCACTTCTTATGACACCTCATGCAGCGTCCTTGATGATTATCGAAGAACTAGTAACTTCATTTGACTATGCAACAAATAACATGCATTTGGCTGCAATCAGTTCCCCTCAGGTTCTCAATGGACTTCTAGAAGTTGCAAGAAATGATAATCTTGAACACTTTTTCTCTTTGACTACCATTCTTATAAAATGCATGCAGTTTGATGCACAGTGCAGAAAGTATGTGTCACAATTCACTCCTCTTGCTCCCTTTATCCACCTTCTGCAGACAGAAAACACCCGTGCCAAATGCATGGCACTCGAATTTTTTCATGAAATCCTTTGCATACCGCGATCATCAGCTATTAGTCTATTGCAGCGTATACAGCAAGAAGGAAGCAAAAATATTATGCAGATACTAATGTTTTGTGCTCATCAATTACAACCTGATCACCAGCTTTTAGCAGCAAACATATTGCTTCAGTTAGACACATTGAACTCACCTCATAAAAGCTTGTTCAGAGAAGAAGCAGTGCAGATACTTCTGAGGGCTTTGGCATCTGAAGAAAGCTCAGAGCAGATATTATCTGCATCCATTCTATCGAATCTTGCCGGAACATATTCTTGGTCGGGGGAACCATATACAGCCGCATGGTTGCTGAGAAAGACAGGTCTAACATCTCCTTATCACCAAAATATAATAAGAAACTTCAACTGGTTGGACCAGAGCTTACAGGATAGTGGCACAGATTTATGGTGCAGTAAAATTGCAAAATGTATCTTAAGTGTTGGGGATCATGTGTACCATACACTAGAGATGGGACTAAGAAGCAAGACAAAAAAGGTTTCTAGAGACTGCCTTGTAACAATTTCATGGCTTGGATGTCAAATATCGAAAAGTCCAGATAGCCTCAGATATTCTGCATCTGAGATTATACTAAGTGGCATTGAGCAATTTCTGCATCCTGGGATGGATTTGGAAGAAAGACTTCTAGCATGTCTGTGTATTTATAATTATGCTACCGGTAAAGGAAAGCAAAAACTGATTCATTTCTCAGAAGGAGTAAAGCAATCACTAAGACGCCTTTCAAATGTAACTTGGATGGCTGACGAATTACACAGAGTAGCTGATTTCTTGCTGCCAAACATATCACGTATTTCTTGCGTCCACACACAAATCCTCGAGGCAGGTTGCAACTTCAACATAGCAGTTTGCTCCCTCATATACTACAAGGGATTGCTATGTAGTGGATATTCAGATGGATCAATCAAGGTATGGGATATTAGGGGTCACTCAGCCAGTCTTGTATGGGACATTAAGAAGCACAACAAATCTGTGACATGCTTTTCACTTTCCGAACTATCCGATAGCCTTTTAAGCGGTTCTGCTGATAAAACCATAAGGGTGTGGAAAATGATCAAGAGAAAGCTGGAATGCGTTGAAGTGATAGTCTTGAAGGAACCCATTTATCGATTACACGCACATGACAAAACAATTTTTGCAATCACTGAAAGCCAGGGAGTAAAGCTAGTTAACGAATCGAGAATAGTCAGAGATATTTTCAAAGGTAAACATGCAAAGTGCATTGCAGGGGCTCAGGGAAAGTTATACATTGGCTGCACAGATTCTAGCATACAGGAGTATTCATCGACATACAACCGGGAAGTAGAAATTAAACTGCCTACAAGGTGTTGGAGGAAGCAAAGTAAGCCCATCCATTCAGTAGTTGCATATAGAGATTGGCTCTATTGTGCAAGTAAGAAGGTTGAAGGCGCAACAATCAAGGAATGGAAAAAAACTGGGAAATCCAAATTTTCAATTGTTATGGACAAGGGAGATAACGTGGTGGGTATGGAAGTGGTTGAAGACTTCATATACCTAATATCCAACTCATCAGCAAACAACATTCAGATTTGGCTGAGAGGGGGACTAAAAAAATTGGGAAGAGTATCAGCAGGAAGCAAGATAACAAGCCTCCTGGCTGCCAATGATATCATTCTTTGTGGTACCGAAACAGGACTAATCAAGGGCTGGATCCCTTTGTAA 3870 0.3876 MLDLKYMWVLISINRYIVDTLENEKTRSTLKLRCTSKLRIQRQEFFELSEQSVLSNLYWGIDSIEAAIQAQQPEEKSFRLMNSEQMLQVPAMLDEEEVTATVSNRYLVCCSYFYLSVVRNLQGDEWQAALHFLQAVLVSPKLVRTEFASQICDSLFHNGSRSLEHVSAITSEDDIDESVREMARRYKECLLYYKVMLYGEIPWWRSYCSKQSANTMDASNTSCVSTTSVQNEPRSQPSNMVHPLDPEDMMHKMEQESKRFMDAAKYKDHMESLSKEHQIISSIKSFRNTLKEAQSKTPTSIDSFRDEMDSENMDDREFHERTRITKADDLVHETYDWNLNQCIDLPQTPQYTMQEQINDRKMVNFGSSRFIRSIEDVTLSISNYIAKTRNPNLNYHAEELIEEAPKSIKFHLFDPYACKHRPSQKNYEECSYMKLPRSSSIIGNFDEVSSHSGRYSVHEFSELIERESSELIERESSELHYSKALGKCGEEYTVDTASIYECLTSSSGNTYASLKDVLLDELLIVISTSKEEREIRASVSTLTTIISRNKSVIEDIKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPVLVEIVCTSRSRESKQESLLMTPHAASLMIIEELVTSFDYATNNMHLAAISSPQVLNGLLEVARNDNLEHFFSLTTILIKCMQFDAQCRKYVSQFTPLAPFIHLLQTENTRAKCMALEFFHEILCIPRSSAISLLQRIQQEGSKNIMQILMFCAHQLQPDHQLLAANILLQLDTLNSPHKSLFREEAVQILLRALASEESSEQILSASILSNLAGTYSWSGEPYTAAWLLRKTGLTSPYHQNIIRNFNWLDQSLQDSGTDLWCSKIAKCILSVGDHVYHTLEMGLRSKTKKVSRDCLVTISWLGCQISKSPDSLRYSASEIILSGIEQFLHPGMDLEERLLACLCIYNYATGKGKQKLIHFSEGVKQSLRRLSNVTWMADELHRVADFLLPNISRISCVHTQILEAGCNFNIAVCSLIYYKGLLCSGYSDGSIKVWDIRGHSASLVWDIKKHNKSVTCFSLSELSDSLLSGSADKTIRVWKMIKRKLECVEVIVLKEPIYRLHAHDKTIFAITESQGVKLVNESRIVRDIFKGKHAKCIAGAQGKLYIGCTDSSIQEYSSTYNREVEIKLPTRCWRKQSKPIHSVVAYRDWLYCASKKVEGATIKEWKKTGKSKFSIVMDKGDNVVGMEVVEDFIYLISNSSANNIQIWLRGGLKKLGRVSAGSKITSLLAANDIILCGTETGLIKGWIPL* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0076 1289 SUPERFAMILY WD40 repeat-like 1018 1286 IPR036322 GO:0005515
Lan4g0076 1289 Pfam WD domain, G-beta repeat 1047 1079 IPR001680 GO:0005515
Lan4g0076 1289 Gene3D - 1008 1265 IPR015943 GO:0005515
Lan4g0076 1289 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1047 1080 - -
Lan4g0076 1289 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 9 1289 - -
Lan4g0076 1289 PANTHER OS04G0584500 PROTEIN 9 1289 - -
Lan4g0076 1289 ProSiteProfiles Trp-Asp (WD) repeats profile. 1021 1044 IPR001680 GO:0005515
Lan4g0076 1289 ProSiteProfiles Trp-Asp (WD) repeats profile. 1047 1080 IPR001680 GO:0005515
Lan4g0076 1289 SUPERFAMILY ARM repeat 651 972 IPR016024 -
Lan4g0076 1289 MobiDBLite consensus disorder prediction 224 238 - -
Lan4g0076 1289 MobiDBLite consensus disorder prediction 291 317 - -
Lan4g0076 1289 MobiDBLite consensus disorder prediction 224 243 - -
Lan4g0076 1289 MobiDBLite consensus disorder prediction 302 317 - -
Lan4g0076 1289 SMART WD40_4 1040 1079 IPR001680 GO:0005515
Lan4g0076 1289 SMART WD40_4 995 1035 IPR001680 GO:0005515
Lan4g0076 1289 Gene3D - 497 993 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0076 - - gmx:100782870 1948.33