Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0073 ATGCCAAGAAATGCTAGCAAAAACTTAACTTCACAAAAAATGGAACCTTACAGCTTGTATTTCACATTGCTGATACAACATTCCAACACTATCATTGACCTTATTATCCCACATTCACATTATTTTGCAGTGGTGTTGGTTGCAAGTATAGTAATCCTCTACTTTGCAAGCAGAAGAAAAGTTCCAATTTATTTGATAGACTTTAGCTGTTGTTGTCCACCAAGGTCTTATAGGCTACCTTTAGCCATGTTTGAAGAGCATAGTCTTTTAGACCATATGGATCCAGATGCTGTTGCTTTCCAATGCAAGATCATAGCAAAGTCTGGATTCAGTGAGGAAACAGCACTTCCTCAATCTCTTGCTCAGATACCGAGAACGAAAGCTCTTGCCTCTGCCATTGAGGAGGCCGAAACAGCAATGTATTCAGCAATTACATGCCTGTTTGAGAAAAACAACATCAACCCGAAAGCCGTTGACATACTTATTACTAATAGTTGTGTGTTTTGTCCTACACCATGTCTTAGTGACATGGTGGTTAACAAGTTCAGAATGAGGAGCAATATCATGAGCTTCCACCTATCAGGTATGGGATGTAGTGCTGGAATCATATCGGTGAGTCTCGCTAAAGACTTGTTGAGAGTTCACCGGAACTCACTGGCTCTAATTGTAAGCACTGAGACCTTGACTCATAATTGGTACAATGGTAAAGTCCCATCCATGCTGCTATCTAATTGCCTATTCAGAATGGGTGGAGCAGCTATATTGATGTCTAGCAGGGTCCAAGATAAGCATAAGGCGAAGTATAAGCTACAACATATCGTTAGAACAACGACAGCGCGAGATGATCAATCTCAGGGTTGTGTCTACCAGGATGTGGATCCAGAGGGCAATGAAGGTGTATCAATATCAAAGAACATAGTCATTGTGGCTGGCGATGTACTGAAGAAAAATATAGCTTCACTAGGACCTTTGGTTTTGCCATTGAGAGAGCAATTCCTGCATGTATTTTCCATTATTCGTCGCAAGCTATGGGCGACAAGAACAAGCATCTATACTCCAAATTTCAATCATGCTTTCGAGCATTTCTGCATACATCCCGGGGGGAAAGCTATTATAAAAGCCATTGAAAAAAACTTGGGGTTGAGGAAAGTGGACATGGAACCAGCAACTATGACTCTCTACAGGTTCGGGAATACTTCAACTTCTTCAATTTGGTATGAGCTGTGCTACATAGAAGCAAAAGGGAGAATGAAATGTGGGGATAGGGTGTGGCAACTTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTTTATGTGATGTGAAACCAGACACTGCAAGTGCATGGAGTGATATAATTCACTCTTACCCTATAGAAGTACCTGATATTGTGAGAATAAATTGA 1416 0.4103 MPRNASKNLTSQKMEPYSLYFTLLIQHSNTIIDLIIPHSHYFAVVLVASIVILYFASRRKVPIYLIDFSCCCPPRSYRLPLAMFEEHSLLDHMDPDAVAFQCKIIAKSGFSEETALPQSLAQIPRTKALASAIEEAETAMYSAITCLFEKNNINPKAVDILITNSCVFCPTPCLSDMVVNKFRMRSNIMSFHLSGMGCSAGIISVSLAKDLLRVHRNSLALIVSTETLTHNWYNGKVPSMLLSNCLFRMGGAAILMSSRVQDKHKAKYKLQHIVRTTTARDDQSQGCVYQDVDPEGNEGVSISKNIVIVAGDVLKKNIASLGPLVLPLREQFLHVFSIIRRKLWATRTSIYTPNFNHAFEHFCIHPGGKAIIKAIEKNLGLRKVDMEPATMTLYRFGNTSTSSIWYELCYIEAKGRMKCGDRVWQLAFGSGFKCNSAVWKCLCDVKPDTASAWSDIIHSYPIEVPDIVRIN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0073 471 PIRSF Very_long_ch_3-ktacl-CoA_syn 7 471 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan4g0073 471 PANTHER 3-KETOACYL-COA SYNTHASE 34 471 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan4g0073 471 SUPERFAMILY Thiolase-like 270 441 IPR016039 GO:0016746
Lan4g0073 471 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 359 440 IPR013747 -
Lan4g0073 471 CDD CHS_like 76 439 - -
Lan4g0073 471 SUPERFAMILY Thiolase-like 51 259 IPR016039 GO:0016746
Lan4g0073 471 Pfam FAE1/Type III polyketide synthase-like protein 56 343 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan4g0073 471 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 34 471 - -
Lan4g0073 471 Gene3D - 86 440 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0073 Lan-Chr4 934690 936508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0073 38 462 Miscellaneous Gene Families AT1G19440 51.044 5.99e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0073 K15397 - gmx:100783404 721.079