Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1739 ATGAGGATTGAAGCAGAAAGTGATGGAGTCTCAGCTTCTAGAAAACATCTTGTTTTTGCTTATTATGTTACTGGTCATGGTTTTGGACATGCCACTCGTGTCACTGAGGTGGTGAGGCATTTGATTCTTGCTGGGCATGATGTTCATGTGGTCACTGGTGCTCCTGATTTTGTTTTCACCTCTGAAATACAGTCACCTCGTTTATTCATTCGCAAGGTGCTTTTGGACTGTGGAGCTGTTCAGGCAGATGCTTTGACGGTTGATCGACTTGCCTCTTTGGAGAAGTATTCGGAGACAGCAGTGAAGCCCCGTGCTAGTATCTTGGAAATAGAAACGGAGTGGCTGAATTCTATCAAAGCTGACTTAGTGGTCTCTGATGTTGTCCCAGTAGCATGTCGTGCGGCAGCAGATGCTGGCATTCGCTCTGTTTGTGTGACCAATTTCAGTTGGGACTTCATCTACGCCGAGTATGTGATGGCTGCTGGAATTCATCACCGCTCGATAGTTTGGCAGATAGCTGAGGACTACTCCCATTGCGAGTTCCTTATCCGGCTTCCAGGATATTGCCCTATGCCTGCTTTTCGGGATGTTATTGATGTACCTCTGGTTGTGAGGAGGTTACACAAATCTGCAAAAGAGGTGAGGAAGGAACTCGGGATAGATAATGATGTGAAGCTAGTTATTCTCAACTTTGGTGGACAGCCGTCTGGATGGAAGCTGAAGGAGGATTACTTACCCGAAGGATGGTTGTGCCTGGTTTGTGGTGCTTCCGAAAGCGAAGACCTCCCTCCAAACTTTAAAAAGCTTGCTAAAGATGCATATACGCCTGACATTATTGCAGCGTCGGACTGTATGCTTGGAAAAATTGGATATGGCACCGTTAGTGAAGCCTTGGCATACAAGTGTCCATTTGTCTTTGTGCGTAGAGATTATTTCAACGAAGAACCTTTTTTGAGAAATATGCTTGAGTATTACCAATGTGGTGTTGAAATGATTAGGAGAGATTTACTCACTGGTCACTGGAGACCTTATCTTGAACGTGCAATAAGTTTGAAACCCTGCTATGAAGCAGGCATCAATGGTGGTGAGGTGGCAGCTCACATCCTGCAGGAAACGGCCTTCGGAAAAAATTATGCATCGGATAAGCTTAGTGGTGCACGGAGATTACGTGATGCCATAGTTCTTGGATATCAACTACAAAGGGCCCCTGGCCGAGATATTGATATTGCGATCCCAGAATGGTATGTAACTGCCGAAAACCAACTTGGCCAGTCATCACCAAGTTCCCCTGTGGGTGTTGGAGGCTCTGTATTCGGTATCGAAGACTTTGAGATTCTTCACGGAGATGTTCAAGGTTTTCCAGATACTGTGGCTTTCTTAAAGGGCTTATCTGAATTAGGAGAGAAGCACACGAGGCGAGAGCGTAAGGCTGCATCTAGTCTCTTCAACTGGGAGGAAGATATTTTTGTGGCTAGAGCCCCCGGAAGGTTAGATGTAATGGGTGGTATTGCTGACTACTCTGGAAGCCTTGTTCTGCAGATGCCAATTAGAGAAGCATGCCATGTTGCTTTGCAAAAGGTCCATCCAAGTAAGCATAGGTTGTGGAAACATGCTCAGGCTCGACAAAACGCCAAAGGAGGAAATCCGAAAGCTGTTTTGCAAATTGTATCATATGGCTCAGAATTGAGCAACCGTGGTCCGACATTTGACATGGATTTGTCTGACTTTACGGATGAAGAAGGCAACCCAATCTCGTACGAGAAAGCAAATAAATACTTTGCTCAAGATCCTTCACAAAAGTGGGCAGCATATGCTGCCGGGGCAATTTTGGTCTTAATGCATGAATTGGGTGTACGTTTCGAAGATAGTATCAGCATGCTGATTTCATCTGCAGTCCCGGAAGGGAAAGGAGTATCATCTTCTGCATCGGTGGAAGTAGCCAGCATGTCTGCTATTGCAGCTGCTCATGGATTAAATATCATGCCAAGAGATCTGGCCTTGCTCTGCCAGAAGGTGGAAAATCACATTGTAGGAGCTCCATGCGGTGTCATGGACCAGATGGCTTCAGCATGTGGCGAAGCCAACAAACTTCTTGCTATGATTTGCCAGCCTGCCGAGATTGTTGGTCTTGTAGAAATTCCCAATCATATCCGGTTCTGGGGACTTGATTCCGGAATAAGACACAGCGTTGGAGGTGCAGACTATGGATCTGTTAGAATTGGCACCTTTATGGGTCTGAAGATGATCAAGTCCAAGGCATCCGAAGAATTGTCCGAGTTGCGTGCTGATGGAGTGAACTACGACGAAGTGGAACAAGATGATATAGAACTTCTTAAACAAGAGGCCTCCTTGGATTACTTATGTAATTTGTTACCTCACAGATATGAGGCTCTTTATGCTAAGGCAATTCCTGAATCCATTATTGGTGAGACATTTTTGGAACAATACAATAATCACAATGACGCGGTCACTATTATTGATCAGAAGCGAACTTACAGCGTGAGGTTTCCGACAATACATCCAGTCTATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTAACATCGGCAACTTCAAATGATCAACTTACAGCCTTAGGAGAGTTGCTATATCAGTGCCACTATAGCTATGGTGCTTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTACACTTGGTGCAAGAATTGCAGCATAGTGCAGCATCTAAAGCAGAAGGTGTGACATTATGCGGCGCAAAGATCACTGGTGGCGGTTCTGGTGGAACAGTTTGTGTGATTGGTAGAAATTGTCTCAAGAGCAGTGAACATATTTTTGAGGTTCAGAAGAGGTACAAAAAAGCTACTGGTTATCTGCCCTTTATTTTTGAGGGTTCATCACCGGGTGCGGGTAAGTTCGGGTACCTGAAAATACGCCGACGAGCTGTTCACGCCACTGAGGATGATAGTTCACTAAGTCCACCATAA 2970 0.4525 MRIEAESDGVSASRKHLVFAYYVTGHGFGHATRVTEVVRHLILAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRASILEIETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGIHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELGIDNDVKLVILNFGGQPSGWKLKEDYLPEGWLCLVCGASESEDLPPNFKKLAKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDIDIAIPEWYVTAENQLGQSSPSSPVGVGGSVFGIEDFEILHGDVQGFPDTVAFLKGLSELGEKHTRRERKAASSLFNWEEDIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKVHPSKHRLWKHAQARQNAKGGNPKAVLQIVSYGSELSNRGPTFDMDLSDFTDEEGNPISYEKANKYFAQDPSQKWAAYAAGAILVLMHELGVRFEDSISMLISSAVPEGKGVSSSASVEVASMSAIAAAHGLNIMPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPNHIRFWGLDSGIRHSVGGADYGSVRIGTFMGLKMIKSKASEELSELRADGVNYDEVEQDDIELLKQEASLDYLCNLLPHRYEALYAKAIPESIIGETFLEQYNNHNDAVTIIDQKRTYSVRFPTIHPVYENFRVKTFKALLTSATSNDQLTALGELLYQCHYSYGACGLGSDGTDRLVHLVQELQHSAASKAEGVTLCGAKITGGGSGGTVCVIGRNCLKSSEHIFEVQKRYKKATGYLPFIFEGSSPGAGKFGYLKIRRRAVHATEDDSSLSPP* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1739 989 SUPERFAMILY GHMP Kinase, C-terminal domain 717 966 IPR036554 -
Lan3g1739 989 Pfam GHMP kinases C terminal 861 931 IPR013750 -
Lan3g1739 989 SUPERFAMILY Ribosomal protein S5 domain 2-like 481 706 IPR020568 -
Lan3g1739 989 Gene3D Glycogen Phosphorylase B; 208 350 - -
Lan3g1739 989 PANTHER L-ARABINOKINASE 17 973 - -
Lan3g1739 989 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 22 331 - -
Lan3g1739 989 PIRSF Gal_kin_glcsltr 1 978 IPR012369 -
Lan3g1739 989 Pfam Galactokinase galactose-binding signature 482 526 IPR019539 -
Lan3g1739 989 Gene3D Glycogen Phosphorylase B; 11 166 - -
Lan3g1739 989 Gene3D - 469 720 IPR014721 -
Lan3g1739 989 Gene3D - 818 951 IPR036554 -
Lan3g1739 989 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 973 - -
Lan3g1739 989 PRINTS Mevalonate kinase family signature 493 517 - -
Lan3g1739 989 PRINTS Mevalonate kinase family signature 630 652 - -
Lan3g1739 989 PRINTS Mevalonate kinase family signature 673 692 - -
Lan3g1739 989 PRINTS Mevalonate kinase family signature 913 930 - -
Lan3g1739 989 Pfam GHMP kinases N terminal domain 627 692 IPR006204 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1739 Lan-Chr3 29970879 29980074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1739 K12446 - gmx:100306164 1720.67