Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1718 ATGGCTTCTTCTCTTCTCTCAATACCTTCACTCTCTTTACAATACAATGACAAGCTTAAGGTTGGAGGAAACAGTTTGAGGTTTAGCAAGGAACAATCAAACACCTTCTCAAATGCAAAGTCTTCTGGCCGTATCTCTATGGTGGCTGCGGTTAATGTTTCTCGATTTGAGGGCATTCCGATGGCTCCTCCAGATCCAATTCTTGGAGTTTCTGAAGCATTTAGAGCAGACACGAGTGATGCCAAGCTCAATCTTGGAGTTGGTGCCTACAGAACTGAAGAATTGCAGCCATACGTGCTTAAAGTTGTTAACAAGGCAGAGAATCTTATGCTGGAGAGAGGGGAAAACAAAGAGTATCTAGCTATTGAGGGTTTAGCTGCATTTAATAAGGCAACTGCAGAGTTGCTACTTGGAGCCGACAATCCTGCAATCAAACAACAAAGAGTTGCAACTGTCCAAGGTCTTTCTGGAACGGGTTCTCTGCGACTAGGAGCGGCTTTGATAGAACGTTATTTTCCTGGGGCAAAAGTTTTGATATCAGCTCCTACCTGGGGAAATCACAAGAATATTTTCAATGATGCTAGGGTTCCATGGTCCGAGTACCGATATTATGATCCCAAGACAGTTGGTTTGGATTTTGAGGGCATGATAGAAGATATAAAGGCAGCTCCTGAAGGAACTTTTGTGCTACTTCATGGATGTGCTCATAACCCTACTGGTATTGACCCAACACCTGAACAGTGGGAAAAAATAGCTGATGTAATTCAAGAAAAAAACCACATTCCATTTTTTGATGTTGCTTACCAGGGGTTCGCTAGTGGAAGCCTTGATGAAGATGCAGCATCTGTGAGATTGTTTGTGGCACGTGGCTTGGAGGTTCTTGTTGCTCAGTCCTACAGTAAAAATCTCGGTCTGTATGCTGAAAGGATTGGAGCAATCAATGTCATTTCCTCATCTCCGGAATCTGCTGCAAGGGTGAAGAGCCAATTGAAAAGGATTGCACGACCAATGTACTCGAACCCACCTGTCCACGGGGCAAGGATTGTTGCCGATATTGTTGGAAACCCAGCTCTCTTCGATGAATGGAAAGTGGAGATGGAAATGATGGCTGGAAGGATAAAGAATGTTAGACAGCAGCTCTATGACAGTATTTCTTCTAAAGACAAGAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATACACAGGCCTCAACAAGAACCAGAGTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGAATTTCACTGGCAGGATTGTCATTGGCGAAATGTGAATACCTTGCAGATGCTATTATTGATTCCTTTCATTATGTCAGCTGA 1371 0.4311 MASSLLSIPSLSLQYNDKLKVGGNSLRFSKEQSNTFSNAKSSGRISMVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKAENLMLERGENKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGARIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1718 456 Gene3D Aspartate Aminotransferase, domain 1 59 448 IPR015422 GO:0003824
Lan3g1718 456 PRINTS Aspartate aminotransferase signature 229 248 IPR000796 GO:0006520|GO:0008483
Lan3g1718 456 PRINTS Aspartate aminotransferase signature 260 272 IPR000796 GO:0006520|GO:0008483
Lan3g1718 456 PRINTS Aspartate aminotransferase signature 328 353 IPR000796 GO:0006520|GO:0008483
Lan3g1718 456 PRINTS Aspartate aminotransferase signature 397 415 IPR000796 GO:0006520|GO:0008483
Lan3g1718 456 Pfam Aminotransferase class I and II 82 448 IPR004839 GO:0009058|GO:0030170
Lan3g1718 456 CDD AAT_like 83 448 - -
Lan3g1718 456 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 3 454 - -
Lan3g1718 456 SUPERFAMILY PLP-dependent transferases 54 450 IPR015424 -
Lan3g1718 456 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 298 311 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lan3g1718 456 PANTHER ASPARTATE AMINOTRANSFERASE 3 454 IPR000796 GO:0006520|GO:0008483
Lan3g1718 456 Gene3D - 114 355 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1718 Lan-Chr3 29710008 29713913 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1718 K00811 - gmx:547792 808.905