Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1696 ATGCTTCCCCGATTCTCTAATCTCCTCCGCTCCACTCCCATTGACTCCGCCAACACCACCATGGCGGCGCGTGCGGCTTTCACTTTCACACGCGCCACCTTCATTCCTTCATTTTCTTCTTCCTCCTCTTCTCATTTCGCTTCCGTTCATCTCTCAAACCTTCCTTTCGTTTCTTTTCATTCAAAATCACCATGGCTTGGATTTCACGATGCTCTGTGCCGTAACGAAACGAAGCGTTTGGGGACACCGTTGGTGAGAGCAAGTTCGGAACAGAAGAGAGAGTATCGGAAAGTGAGAAGAACGCGAGGTTCTAAAATCACTCCGAAGGAGTTGGAACTCTCTGTTGGTATTTGTATTGAAGAAGATTTGCCTGATGATCCTGAAGTTTTGAACATTGCAGAGATGCTTCGCCTAAATGTTCCCATGGCAATGAAACTGGCATTTGATGGTTTGAAAGGTTCGGAGTATAAAACAAGAGATGCTGCTATAAGTGATGTTGGTGGATTTGAAAGTATTGAGTTATCAGTGCTTCTATGCAATGATGACTTTATTCGAAAACTTAATAAGGAATGGAGAGACGAGGATCATGCCACTGATGTTCTCTCAATGTCATCACATATACCAGGGCTTAAGCTCCCTATTCTTATGATGGGGGACATTGTAATTTCTGTCGAGACAGCAGCAAGGCAAGCAGAGGAAAGAGGGCTCAGTCTTATTGATGAGATCCGTATCCTCATGGTTCATGGCTTGTTACATCTTTTGGGATTTGATCATGAAATAAGTGAAGAGGCTGAAGTGGAAATGGAGAAAGAGGAGGAACTCCTTTTAAAGAGTCTCGGTTGGAAAGGAAAAGGGCTAATAAAGAGTGCATATGATACTGAAATAAATTCAAATTCTCACCATGATGGTTCTGATGACAGGAAAAAAGAAGGCAGTCTTAGATTTTACAAACCAAAGTTCAGTCATATCTTCTGTGATATGGATGGAACATTGCTGAACAGCAAAAGTCAAATTAGTCCTGCGACTGCCAACGCATTGAGAGAGGCCACATCAAGAGGTGTAAAAATTGTGATAGCTACCGGAAAGGCGCGTCCAGCTGTGATAGATATTTTTAAGATGGTGGATTTAGCTGGAAAAGATGGCATTGTTTCAGAGTTTTCTCCTGGGGTTTTCTTACAGGGATTGCTTGTTTATGGTAGACAAGGTCAAGAAATATTTAGGAGCAACTTAGATCCAAACGTCTGTAGAGAGGTATGTCTTTACTCTTTGGAGCATAAGGTTCCGCTCGTTGCATTTGCTGAAGGCCGCTGCTTAACCCTTTTTCATGACCCACTTGTCGATTCACTGCATACAGTATACCACGAACCAAAGGCTGAGATCATGCCTTCTGTAGAACAACTTCTAGCTTCTGCTGAGATACAGAAAATGATTTTCTTAGATACCGAGCAGAGGGTGGCTAGTACTTTACGGCCACACTGGTCACAGGCAACAGAAGGTCGTGCCACTGTTGTTCAAGCTGTGCCAGACATGCTGGAAATTGTACCCTTGGGAACATGCAAAGGGAATGGAATAAAATTGCTGCTAGATCATTTGGGGGTTTCTGCGAAGGAGATAATGGCTATTGGTGATGGTGAAAATGATGTTGAGATGCTTGAGCTGGCATCTCTAGGCATTGCACTTAGTAATGGATCAGAGAAGACCAAAGCTGTGGCTAATGTAATTGGTTCCAGCAATGATGAAGATGGTGTAGCAGATGCCATCTACCATTACGCATTTTGA 1779 0.4328 MLPRFSNLLRSTPIDSANTTMAARAAFTFTRATFIPSFSSSSSSHFASVHLSNLPFVSFHSKSPWLGFHDALCRNETKRLGTPLVRASSEQKREYRKVRRTRGSKITPKELELSVGICIEEDLPDDPEVLNIAEMLRLNVPMAMKLAFDGLKGSEYKTRDAAISDVGGFESIELSVLLCNDDFIRKLNKEWRDEDHATDVLSMSSHIPGLKLPILMMGDIVISVETAARQAEERGLSLIDEIRILMVHGLLHLLGFDHEISEEAEVEMEKEEELLLKSLGWKGKGLIKSAYDTEINSNSHHDGSDDRKKEGSLRFYKPKFSHIFCDMDGTLLNSKSQISPATANALREATSRGVKIVIATGKARPAVIDIFKMVDLAGKDGIVSEFSPGVFLQGLLVYGRQGQEIFRSNLDPNVCREVCLYSLEHKVPLVAFAEGRCLTLFHDPLVDSLHTVYHEPKAEIMPSVEQLLASAEIQKMIFLDTEQRVASTLRPHWSQATEGRATVVQAVPDMLEIVPLGTCKGNGIKLLLDHLGVSAKEIMAIGDGENDVEMLELASLGIALSNGSEKTKAVANVIGSSNDEDGVADAIYHYAF* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1696 592 Gene3D - 409 516 - -
Lan3g1696 592 TIGRFAM TIGR00043: rRNA maturation RNase YbeY 173 279 IPR002036 GO:0004222|GO:0006364
Lan3g1696 592 ProSitePatterns Hypothetical cof family signature 2. 541 563 - -
Lan3g1696 592 Gene3D - 323 587 IPR023214 -
Lan3g1696 592 TIGRFAM Cof-subfamily: Cof-like hydrolase 323 587 IPR000150 GO:0016787
Lan3g1696 592 CDD HAD_Pase 323 589 - -
Lan3g1696 592 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 29 592 - -
Lan3g1696 592 Pfam Endoribonuclease YbeY 168 278 IPR002036 GO:0004222|GO:0006364
Lan3g1696 592 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 29 592 IPR002036 GO:0004222|GO:0006364
Lan3g1696 592 Gene3D Metalloproteases ("zincins"), catalytic domain 153 285 IPR023091 GO:0004222
Lan3g1696 592 SFLD C2.B: Phosphomannomutase and Phosphatase Like 323 591 - -
Lan3g1696 592 Hamap Endoribonuclease YbeY [ybeY]. 114 283 IPR002036 GO:0004222|GO:0006364
Lan3g1696 592 SUPERFAMILY HAD-like 316 590 IPR036412 -
Lan3g1696 592 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 165 285 - -
Lan3g1696 592 SFLD Haloacid Dehalogenase 323 591 - -
Lan3g1696 592 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 322 559 IPR006379 -
Lan3g1696 592 Pfam haloacid dehalogenase-like hydrolase 323 587 - -
Lan3g1696 592 ProSitePatterns Uncharacterized protein family UPF0054 signature. 248 258 IPR020549 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1696 - - lang:109344407 1099.73