Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1657 ATGGTTAGTTCCTCAAATTCCCCTGCACAAAAGATGAGACTTCTTGAATTATCACTCTCTGATGGAAATGGTTCCTCAGATGAACCTTTACCTCAGGATGCAGATTATAATGGTCCATTTCTCAGTGATGAGTTAGAGACCACAATCTTGGTTAGAATGCCAAGATCACAGCACTGGAAATTGTGTTTCTTAGATAAGCGATTCTCGAGTCTAGTGAATAGCGGCGAAATCTATAAGGTTCGAAAAGAGCTAGGATTCGTAGAACCATCCGTGTTTATGTTAGCTAGTGGTGAGAGTAACTGGTGGGGAATGGATTGGCCTTTCAAGTCAAGTAGGAAGCTTCCAATTATCCCATCAGATTATAGTTTTAAGTATGGAGATAAGGAGTCTTTCACTGCAGGGTCTCATCTTTTAGTCTCGGGCAAGGAATTCGATGGACCGGTTATTTGGAGGTACGAGTTCGCGACGAATCAATGGCTCAAGGGTCCTTTTATGAACAATCCAAGGTGTCTTTTCGCATCGGCTACTTGCGGTAATTTCGCCTTTGTTGCAGGCGGTATTGACACGAATACTTATAGCCAAGTCTTGGATACTGCTGAGAGATATAATTCAGAGAGCAAGTCGTGGGAACTTCTTCCTAAGATGAATCAGAAAAGGAAGTTTTGCTCTGGTTGTTTCATGGATGATAAGTTCTATGTTATTGGAGGACAAGATGAGCATCAAAAGGATCTCAATTGTGGTGAATTCTTTGATGCTAAGACAAACAGTTGGAACTTGATTCCTCAAATGTTGAAAGATATTCCTCTTTCGGTTTCACAATCTCCGCCTCTTGTCGCTGTCGCGAATAATCAGCTCTACACACTTGATTCTTCTTCCAATGAGCTAAAGGTTTATATGAAGGAAAGCAACTTATGGAAGAAACTAGGCCGAGTTCCGGTGAGAGCTGATGCACAAGGAGGTTGGGGTGTAGCATTTAAGTCTCTAGGCGATGAGTTACTTGTAATTGGCGCGCCATTGGTCTCTCATACCGAGCGCGCCTTGACTATATACACTTGCTGCCCGGATCCGGCTACTGAGAAACTAAGGTGGAGGCAAATTGACTGTGGCAGCATCCAGCTTAATCACTTTATCCATAATTGTGCTGTGATGCGAGGAACCTGA 1161 0.4307 MVSSSNSPAQKMRLLELSLSDGNGSSDEPLPQDADYNGPFLSDELETTILVRMPRSQHWKLCFLDKRFSSLVNSGEIYKVRKELGFVEPSVFMLASGESNWWGMDWPFKSSRKLPIIPSDYSFKYGDKESFTAGSHLLVSGKEFDGPVIWRYEFATNQWLKGPFMNNPRCLFASATCGNFAFVAGGIDTNTYSQVLDTAERYNSESKSWELLPKMNQKRKFCSGCFMDDKFYVIGGQDEHQKDLNCGEFFDAKTNSWNLIPQMLKDIPLSVSQSPPLVAVANNQLYTLDSSSNELKVYMKESNLWKKLGRVPVRADAQGGWGVAFKSLGDELLVIGAPLVSHTERALTIYTCCPDPATEKLRWRQIDCGSIQLNHFIHNCAVMRGT* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1657 386 SUPERFAMILY Kelch motif 103 382 IPR015915 GO:0005515
Lan3g1657 386 SMART kelc_smart 182 229 IPR006652 GO:0005515
Lan3g1657 386 SMART kelc_smart 144 179 IPR006652 GO:0005515
Lan3g1657 386 SMART kelc_smart 230 283 IPR006652 GO:0005515
Lan3g1657 386 Pfam Kelch motif 219 263 IPR006652 GO:0005515
Lan3g1657 386 Pfam Kelch motif 168 216 IPR006652 GO:0005515
Lan3g1657 386 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 6 384 - -
Lan3g1657 386 Gene3D - 88 369 IPR015915 GO:0005515
Lan3g1657 386 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 6 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1657 Lan-Chr3 28836145 28838819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1657 40 260 Miscellaneous Gene Families AT4G33900 23.894 1.16e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1657 - - aprc:113863834 627.476