Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1601 ATGGTTGAGAAAGTTGGTGTTAACAACAACATCCATAACCAAACATTTGATGTCTCTGTTGATGTTCATCAACAAGGAGCCTCTAAGTGCTTTGATGATGATGGTCGCCTCAAAAGAACCGGAACTGTTTGGACTGCAAGTGCTCACATAATAACTGCAGTGATTGGTTCTGGAGTTCTGTCTCTTGCTTGGGCTATAGCTCAGCTTGGATGGATAGCTGGTCCTGCTGTTATGATTCTCTTCTCTTTGGTCACATATTATACCTCCACCCTTCTTTCCGCTTGTTACAGAAATGGTGACCCTGTTTCTGGAAAGAGAAACTATACTTACATGGATGCTGTTCATTCAAATCTTGGTGGCTTTAAGGTCAAGCTTTGTGGGCTAGTTCAATATGTTAACCTTTTTGGAGTTGCCATTGGATACACTATAGCATCTTCCATAAGCATGATGGCAATCAAAAGGTCTAATTGTTTCTACAAGAGTGGAGGGAAAAATCCATGCAAAATGAACAGCAACATTTACATGATTTCATTTGGTGTAGCAGAAATAATTTTCTCTCAGATTCCAGACTTTGATCAGTTATGGTGGCTCTCCCTTGTAGCTGCTGTTATGTCCTTCACTTACTCAACAATTGGGCTTGGACTTGGTATTGGAAAAGTTATAGAAAACAAAGGATTTAAGGGAAGCCTAACAGGAATCACTGTTGGTACTGTCACAGAAACTGAAAAAGTTTGGAGGAGCTTCCAAGCTCTTGGTGACATAGCCTTTGCCTATTCATACTCAATGATTCTTATAGAAATTCAGGACACAGTGAAATCCCCTCCATCAGAGTCAAAAACAATGAAGAAAGCAACTCTAGTTAGTGTTATAGTCACCACACTTTTCTACATGCTATGTGGCTGCTTTGGTTATGCTGCTTTTGGAGATGCAAGCCCAGGAAACCTTCTAACCGGTTTCGGATTCTACAACCCATACTGGCTCCTTGACATAGCCAATGCTGCAATAGTTATCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTCTTTGCATTCATTGAGAAAAATGCATCAAAAAGGTTCCCAAACAGTGACTTCATAAACAAGGACATTGAAGTTCCAATACCAGGTTTCATACACCCTTATAGACTCAACCTCTTCAGGTCAATTTGGAGAACAATATTTGTGATCATAACCACTGTCATATCAATGCTCCTTCCATTCTTCAATGACATTGTTGGACTTCTTGGTTCTCTTGGATTTTGGCCTCTAACAGTGTATTTCCCAGTGGAAATGTATATTATTCAAAAGAGAATACCAAAGTGGAGCACTAAATGGATTTGTCTTCACATGCTTAGTATTGCATGCCTTATAATAAGTATAGCTGCTGCAGCAGGTTCTATTGCTGGGGTTGTTAGTGATCTTAAATCTTATAAGCCATTCAGCACTGAGTACTAG 1461 0.4004 MVEKVGVNNNIHNQTFDVSVDVHQQGASKCFDDDGRLKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMILFSLVTYYTSTLLSACYRNGDPVSGKRNYTYMDAVHSNLGGFKVKLCGLVQYVNLFGVAIGYTIASSISMMAIKRSNCFYKSGGKNPCKMNSNIYMISFGVAEIIFSQIPDFDQLWWLSLVAAVMSFTYSTIGLGLGIGKVIENKGFKGSLTGITVGTVTETEKVWRSFQALGDIAFAYSYSMILIEIQDTVKSPPSESKTMKKATLVSVIVTTLFYMLCGCFGYAAFGDASPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVYCQPLFAFIEKNASKRFPNSDFINKDIEVPIPGFIHPYRLNLFRSIWRTIFVIITTVISMLLPFFNDIVGLLGSLGFWPLTVYFPVEMYIIQKRIPKWSTKWICLHMLSIACLIISIAAAAGSIAGVVSDLKSYKPFSTEY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1601 486 PANTHER OS05G0424000 PROTEIN-RELATED 10 480 - -
Lan3g1601 486 Pfam Transmembrane amino acid transporter protein 39 473 IPR013057 -
Lan3g1601 486 PANTHER AMINO ACID CARRIER 10 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1601 Lan-Chr3 27682683 27685627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1601 11 486 Organic Solute Cotransporters AT1G77380 78.992 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1601 K24917 - jre:109009851 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0590 14 12695123 12698104 Lan3g1601 3 27682683 27685627 LSH