Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1600 ATGAACTCATTGAATTTGAGATTGAGACCCATAGCCACCATGAAGAGAAAAAGAACAACCAAAAAACCGGTTGCGCCACCTTCCTCCACCCCTCCACCACCACCAACACAAACCAAAACCCTCCTTAAAACCCGCCACTCCACACCAAAACCACCAAGCACCATCACCAAATCTCTAAAATTTCCAGAACCTTCTTCCGATAACGTGTGGGTCCCACTCAATCTCACTCGCGAAGAACTCTCCTTACCGTTAACCTTCCCAACCGGTCAAACCTTCCGCTGGAAAAACACCGCACCTTCTCAATTCACCGGCGTCGTTGGGTCCCACATCGTATCCCTCACCCACCTCCAAAACGGCGACGTTTCATACTGCCTTCACGGAACTCACGATGCCGTTGCCGCCAGAACGGCGCTGCTCGATTTTCTCAACGCCGGCGTGTCTCTCCCCGGAATCTGGAAGGTGTTCTCGGATTCCGACGAGAGGTTTGCTGAGCTGGCGAGGCATTTGGGTGGGGCCCGCGTTCTGAGGCAGGAACCATTTGAGTGTTTGATTCAGTTTTTGTGTTCTTCGAATAATAACATTGGAAGGATTACGAAGATGGTGGATTATGTTTCGTCTATTGGGAATTACTTAGGCTCTGTTGAAGGTTTTATGTTCCATTCTTTCCCTACTTTGGAGCAGCTTTCTTTGGTTTCAGAGGAAGATCTTAGAAAAGCTGGTTTTGGTTATAGGGCTAAGTATATAGTTGGCACGGTGAACATTTTGCAATCAAAAACTGGTGGAGGGGAAGAATGGCTTCGGTCCCTACGGAAGTTGGATCTTGAAGATGTTATCTCTGCCCTTTCTACTTTACCTGGAGTAGGTCCTAAAGTGGCTGCTTGCATAGCTCTCTTCTCGCTTGATCAACACCATGCCATTCCTGTTGACACACATGTGTGGCAGATTGCCACGAAGTATCTCTTACCTGAGCTTGCAGGTTCCCGGTTAACACCAAAGCTTTGCAATCGCGTTGCAGAGGCATTTGTAACCAAATATGGTAAATATGCTGGCTGGGCTCAAACTCTACTATTCATAGCTGAATTACCATCACAAAGGGTCCTCCTACCTTCACATTTGTGGACTACTGATCAGCACAATCACACAAAGAAAGAAGACAGTGAATTACTTGATGGCGTGGCTCTCCGGATATAA 1191 0.4744 MNSLNLRLRPIATMKRKRTTKKPVAPPSSTPPPPPTQTKTLLKTRHSTPKPPSTITKSLKFPEPSSDNVWVPLNLTREELSLPLTFPTGQTFRWKNTAPSQFTGVVGSHIVSLTHLQNGDVSYCLHGTHDAVAARTALLDFLNAGVSLPGIWKVFSDSDERFAELARHLGGARVLRQEPFECLIQFLCSSNNNIGRITKMVDYVSSIGNYLGSVEGFMFHSFPTLEQLSLVSEEDLRKAGFGYRAKYIVGTVNILQSKTGGGEEWLRSLRKLDLEDVISALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATKYLLPELAGSRLTPKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQRVLLPSHLWTTDQHNHTKKEDSELLDGVALRI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1600 396 SMART endo3end 188 361 IPR003265 GO:0006284
Lan3g1600 396 Pfam HhH-GPD superfamily base excision DNA repair protein 184 319 IPR003265 GO:0006284
Lan3g1600 396 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 69 381 - -
Lan3g1600 396 SUPERFAMILY DNA-glycosylase 178 359 IPR011257 GO:0003824|GO:0006281
Lan3g1600 396 Gene3D Hypothetical protein; domain 2 178 302 - -
Lan3g1600 396 Gene3D - 62 140 - -
Lan3g1600 396 MobiDBLite consensus disorder prediction 1 56 - -
Lan3g1600 396 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 73 183 IPR012904 GO:0003684|GO:0006289|GO:0008534
Lan3g1600 396 PANTHER N-GLYCOSYLASE/DNA LYASE 69 381 - -
Lan3g1600 396 CDD ENDO3c 180 358 IPR003265 GO:0006284
Lan3g1600 396 Gene3D - 153 361 IPR023170 -
Lan3g1600 396 SUPERFAMILY TATA-box binding protein-like 64 177 - -
Lan3g1600 396 MobiDBLite consensus disorder prediction 39 56 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1600 K03660 - gmx:100789749 524.242