Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1593 ATGAACGCTTACATTATCGGTATCGTGATTCCTCTCATCGTTCTCCTCTTACGTAACTCCAAAAACCGCAAACGCCGTGGCTTACCCGTCGATGTCGGCGGCGACCACGGCGTGGCGCTACGCAACCACCGATTCACTTCACCGATGAGTTCCGCCTGGGAGGGCGTGACAACACTCGCGGAGATGTTCGAACGTGCATGCAAGGTGCATCCTGATAAATTGTTGCTTGGCACGCGCGGATTGATCTCGAGTGAGATGGAGGTGGTTAATGGAAGAAGCTTCGAGAAGCTTCATCTCGGAGAGTATAAATGGATCACGTATCGTAAAGTGTTTGAAGTTGTTACTGCTTTTGGTTCTGGTTTGGCGAAGCTAGGTCATGTGAGGGAAGAGCGTGTTGCTATTTTTGCTGAAACTAGAGAAGAATGGTTTATTGCACTTCAGGGTTGTTTCAGGAGAAATGCGACGGTTGTGACTATATATGCGTCGTTGGGAGAGGAAGCTTTATGTCATTCATTGAATGAGACGGAGGTTGTAACTGTGATTTGTGGGGGCAAAGAATTGAGAGCACTTGTACATATTAGTGGACAACTTCACTCAGTGAAAAGTGTGATATGCATGGATGATGATATCCCACCTGAAGCCTCGTCTGTTCAGCATGGCTGGACAATCACTTCCTTCACTGATGTTGAGAGACTTGGTCGAGAAAATCCCGTTGATGCGGATTTACCTCTTCCAGGAGACGTTGCTGTTATAATGTACACCAGTGGAAGTACAGGATTGCCTAAGGGCGTGATGATGACACACAGAAATGTCTTAGCAACAGTCTCTGCTGTAATGACAATAGTTCCGAACCTTGCAGATAAGGATGTGTATCTAGCATATTTACCAATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTAATTGCCTCTGTTGGAGGCGCAATTGGATACGGATCTCCTTTGACTCTAACTGATACATCAAACAAAATAAAAAAGGGAACAAAGGGGGATGCCACTGAATTGATGCCAACTGTGATGGCATGTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTGTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGAAATTGTTTGATATAGCCTATGTACGGAGGTTGCATGCAATGAACGGTAGCTGGTTTGGTGCCTGGGGCTTGGAAAAAGCTCTGTGGAATTTTCTCGTGTTTAGAAAGGTCAAAGCAATTCTTGGTGGTCGTATCCGCTTTATACTGTGTGGTGGTGCTCCTCTCTCTGGTGATACCCAAAGATTCATCAATATTTGTCTTGATGCTCCAATTTGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGCGCGGCATTCTCTGATTTTGACGATATTTCTGTTGGCCGAGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAATTGACTGGCCTGAAGGTGGATATTCAGTTAATGACTCGCCAATGCCCCGTGGGGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGATACTTCAAAAATGAAGAAAAGACAAGAGAGTCTTACAAGGTTGATGAAAGAGGAACAAGGTGGTTCTGTACTGGTGACATAGGGAGATTTCATGCAGATGGTTGCATTGAGATCATTGATAGAAAAAAGGACATAGTCAAACTGCAGCACGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTCTTGGCAGCCCCTTTGTGGACAATATCATGTTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCACTCGTGGTGGTTTCTCATCCTGCATTGGAAGGATGGGCTTCAAAGCAAGGAATTGCTTATTCTGATCTTTCGGAACTGTGCGGGAAAGAAGAAACTGGGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAAGCTCGGTTGGAAAAATTTGAGATTCCTGCAAAACTTAAATTGCTTTCTGACCCATGGACTCCTGAGACTGGCCTAGTCACTGCGGCTCTCAAGATCAAGAGAGACCCCATCAGAAAGGCTTTCCATGAAGATCTCTCTAAGTTATATGCTTCATAG 2082 0.4481 MNAYIIGIVIPLIVLLLRNSKNRKRRGLPVDVGGDHGVALRNHRFTSPMSSAWEGVTTLAEMFERACKVHPDKLLLGTRGLISSEMEVVNGRSFEKLHLGEYKWITYRKVFEVVTAFGSGLAKLGHVREERVAIFAETREEWFIALQGCFRRNATVVTIYASLGEEALCHSLNETEVVTVICGGKELRALVHISGQLHSVKSVICMDDDIPPEASSVQHGWTITSFTDVERLGRENPVDADLPLPGDVAVIMYTSGSTGLPKGVMMTHRNVLATVSAVMTIVPNLADKDVYLAYLPMAHILELVAENLIASVGGAIGYGSPLTLTDTSNKIKKGTKGDATELMPTVMACVPAILDRVRDGVFKKVNAKGGLSKKLFDIAYVRRLHAMNGSWFGAWGLEKALWNFLVFRKVKAILGGRIRFILCGGAPLSGDTQRFINICLDAPICQGYGLTETCAGAAFSDFDDISVGRVGPPLPCSYIKLIDWPEGGYSVNDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGTRWFCTGDIGRFHADGCIEIIDRKKDIVKLQHGEYVSLGKVEAALLGSPFVDNIMLHADPFHSYCVALVVVSHPALEGWASKQGIAYSDLSELCGKEETGKEVHASLVKEAKKARLEKFEIPAKLKLLSDPWTPETGLVTAALKIKRDPIRKAFHEDLSKLYAS* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1593 693 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
Lan3g1593 693 Pfam AMP-binding enzyme 98 560 IPR000873 -
Lan3g1593 693 SUPERFAMILY Acetyl-CoA synthetase-like 55 691 - -
Lan3g1593 693 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 692 - -
Lan3g1593 693 Gene3D - 47 552 IPR042099 -
Lan3g1593 693 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1593 Lan-Chr3 27561194 27569380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1593 146 692 Acyl Lipid Metabolism Gene Families AT1G77590 76.234 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1593 K01897 - gmx:100778889 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0607 14 12912616 12920052 Lan3g1593 3 27561194 27569380 LSH