Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1589 ATGGCAGAAGAGAGCGAGAAGAAGAAGGAAAACAAGGACACGATCTTAACAGAAAACGAGGATAACGATATAGAGTCCCATATTCAAATTGCTATGCGTTCTCGCCTCTCTTATTTCAAACAACAATCTGATTCTTTGACATTTGAAGGGGTTCGTAGATTGCTCGAGAAAGATTTAGGATTTCAAGAATATGCTTTCGATGTCCATAAAGCATTTATCAAACAATGCTTACTCAAGTGCTTAGAAGAGGTTGGTGATGATGCCCAAAATGTTGAGCAGGAAGAGGAAAAAGATGCAAGTACACAAGAGACAGAGAATCCAAAAGAAGAATGCCAATCAACAGATGAAAAGGATGGTTGCTCTGAAGATGAGGATAAAATGGAAGACTCTCCAGTATTAGGTCTGCTTAAAGAACAAAAAGGAGTTAAACTTGAAACCAAGGAAGTGAAAGACAATGAGAGGAAAGTAGTTCCAAGTGAGACTGTAATTAAGAAAGCTGTTAGAAAAAGAGCTTCCTACATCAAGGCCAATGCAGAGAAAATCACTATGGCTGGTCTTCGTCGACTTTTGGAGGAAGATCTTAAACTTGATAAATTCACTCTTGATCTCTATAAGAAGCTTATAAGTCAACAGCTAGACGAGGTAATATCGTCTTCAGAAGTTTTGGAACCTGCAAATAATGCTAAGAAAATTGTTAAGAAGAAACCTGATACCAAAGCAACTAAAATGGTCAGCAGTGAAGAGAACTCTGGTATTTCAGATAGTGAGAGTGGCAAGGAAGAAAATGAGGATGATGATGTTAAACCGAGAAAAAAAAGTGTTGCAAAAGGCAAGAAACAGACCACTTTCGATCCTAAAAAGCGTAAAGGGGAGGAAAACAATCTATCCAGTAAGAAAAGGGTCAAGACTGCTAAGGCAGCCTCAGAAGATGACAATGATACAGAAGATAATGGAAAACACTCTGAAGATGATCAGTCCGGGTCATTACCAGAAAAATGTACAAAGAAGAAAGAGGTTTCAACTCCTGTGTATGGTAAACGTGTGGAACACCTAAAATCTGTTATTAAAGCATGTGGAATGAGCATTCCTCCCACAATTTACAAAAAAGTCAAGCAGGCTCCTGAAAACAAGCGTGAAGGGCAGCTAATAAAGGAGTTGGAGGAAATATTGTCCAGAGAAGGATTATCTTCAAATCCCTCTGAAAAGGAAATCAAGGAAGTTCGAAGGAAGAAGGACAGAGCAAAAGAACTTGAGGGTATTGATATGAGCAATATTGTGTCAAGTTCACGTAGAAGATCAACGACTAGTTTTACAGCTACTCCACCTCCAAAGCCCAAGACTCCAGAAAAAACTAATGGGAATGATGCTGAAGACAGTGATAATGATGACAATGATGATGAAGAGGATGAAGAAGATAGCAGTGATGATGAGGGAAGTCAGAGTGAAGAAATTAATGAAGATGAAGAGGACAGTGACTGA 1479 0.3881 MAEESEKKKENKDTILTENEDNDIESHIQIAMRSRLSYFKQQSDSLTFEGVRRLLEKDLGFQEYAFDVHKAFIKQCLLKCLEEVGDDAQNVEQEEEKDASTQETENPKEECQSTDEKDGCSEDEDKMEDSPVLGLLKEQKGVKLETKEVKDNERKVVPSETVIKKAVRKRASYIKANAEKITMAGLRRLLEEDLKLDKFTLDLYKKLISQQLDEVISSSEVLEPANNAKKIVKKKPDTKATKMVSSEENSGISDSESGKEENEDDDVKPRKKSVAKGKKQTTFDPKKRKGEENNLSSKKRVKTAKAASEDDNDTEDNGKHSEDDQSGSLPEKCTKKKEVSTPVYGKRVEHLKSVIKACGMSIPPTIYKKVKQAPENKREGQLIKELEEILSREGLSSNPSEKEIKEVRRKKDRAKELEGIDMSNIVSSSRRRSTTSFTATPPPKPKTPEKTNGNDAEDSDNDDNDDEEDEEDSSDDEGSQSEEINEDEEDSD* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1589 492 MobiDBLite consensus disorder prediction 227 242 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 253 343 - -
Lan3g1589 492 PANTHER HIRA-INTERACTING PROTEIN 3 1 491 IPR037647 -
Lan3g1589 492 MobiDBLite consensus disorder prediction 398 419 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 1 20 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 390 492 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 220 343 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 89 131 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 458 492 - -
Lan3g1589 492 SMART CHZ_2 411 446 IPR019098 -
Lan3g1589 492 MobiDBLite consensus disorder prediction 94 115 - -
Lan3g1589 492 MobiDBLite consensus disorder prediction 422 440 - -
Lan3g1589 492 Pfam Histone chaperone domain CHZ 413 444 IPR019098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1589 Lan-Chr3 27522082 27527375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1589 2 82 EF-hand Containing Proteins AT1G44780 35.802 8.71e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1589 - - gmx:100784738 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0801 15 17170154 17174807 Lan3g1589 3 27522082 27527375 LSH