Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan3g1534 | ATGGATACTGCTGTTGCTGCAGGTCAAAGTCTTTATCCATTGCACCGTTCTAAAACTATTCACCTGGTTAGACATGCCCAAGGATTTCACAATGTAGAAGGGGACAAGAATTATGAAGCATACTTGTCTTACGATCTTTTGGATGCAAGCCTAACACCTCTTGGCTGGAAGCAGGTTGATAATCTGCAAGGGCATGTTAAGAGAAGTGGTCTTTCTAAAAGAATTGAACTAGTTATTGTTTCCCCGTTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGAAGCAGGCAGTGATGGGATTAATTCAACTCCTTTGATGAATGAAAATGTGGGAGATAGTGGCCGTCTTGCAATTTCTAGTCTGAATTCCCCTCCATTTATAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCAATGAGTACCGGAATATGTTTCCAGCAATTGATTTTGCACTGATAGAAAGCGATGAGGACATTTTGTGGAAACCTGACATTAGAGAGAAGAATGAAGAAGTTGCAGCCAGGGGACTGAAATTTTTTGAATGGTTGTGGACACGTAAAGAGAAGGAGATAGCTGTTGTTACCCACAGCGGTTTTCTGTTTCATACGCTAAGTGCTTTTGGAAATGACTGCCATCCAACTGTGAAGAATGAAATCTGCACACACTTTGCAAATTGTGAGCTACGTTCAGTGGTCATCATTGATAGAGGTAAGATTGGATCATATGAGTCAAGTACCAACTTTCCTGGCAAAATTCCTGATGGCCTTGACCTTCCTAGTGATGTTGCTGATGAGAAGCTTTCAGAGACTGATTGA | 852 | 0.4214 | MDTAVAAGQSLYPLHRSKTIHLVRHAQGFHNVEGDKNYEAYLSYDLLDASLTPLGWKQVDNLQGHVKRSGLSKRIELVIVSPLLRTMQTAVGVFGGEAGSDGINSTPLMNENVGDSGRLAISSLNSPPFIAVELCREHLGVHPCDKRRSINEYRNMFPAIDFALIESDEDILWKPDIREKNEEVAARGLKFFEWLWTRKEKEIAVVTHSGFLFHTLSAFGNDCHPTVKNEICTHFANCELRSVVIIDRGKIGSYESSTNFPGKIPDGLDLPSDVADEKLSETD* | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan3g1534 | 283 | CDD | HP_PGM_like | 19 | 90 | IPR013078 | - | |
| Lan3g1534 | 283 | PANTHER | BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED | 5 | 276 | - | - | |
| Lan3g1534 | 283 | SMART | PGAM_5 | 19 | 215 | IPR013078 | - | |
| Lan3g1534 | 283 | Pfam | Histidine phosphatase superfamily (branch 1) | 20 | 93 | IPR013078 | - | |
| Lan3g1534 | 283 | MobiDBLite | consensus disorder prediction | 264 | 283 | - | - | |
| Lan3g1534 | 283 | Gene3D | - | 17 | 261 | IPR029033 | - | |
| Lan3g1534 | 283 | SUPERFAMILY | Phosphoglycerate mutase-like | 18 | 248 | IPR029033 | - | |
| Lan3g1534 | 283 | PANTHER | PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN | 5 | 276 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan3g1534 | Lan-Chr3 | 26809315 | 26814645 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan3g1534 | - | - | gmx:548047 | 502.286 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan15g0911 | 15 | 18402799 | 18408263 | Lan3g1534 | 3 | 26809315 | 26814645 | LSH |