Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1530 ATGAACACTGAACAGTTTCAGAGGAACAGCATGTACATAGAAACCCCTGATGCTTATGGTAATGATGGCAAAAACTTCGACGATGATGGACGAGCCAAAAGAACTGGGACATGGGTAACTGCAAGTGCTCATATAATAACAGCAGTGATAGGGTCTGGAGTACTATCTCTTGCATGGGCAATAGCACAAATGGGATGGGTGGCTGGTCCTGTTGTTCTATTTGCATTCTCATTTATCACATATTTCACTTCCACTCTTCTAGCTGATTGTTATAGGTCACCTGACCCTGTTAATGGCAAACGAAACTATACCTATTCTCAGGTTGTTAGATCTATTCTAGGAGGGAGGAAATTTCAACTTTGTGGATTGGCTCAATATATAAATCTTGTAGGTGTAACAATCGGTTACACCATAACAGCTTCAATTAGTATGGTGGCGGTGAAAAGGTCAAATTGTTTTCATAAACATGGCCATCAAGACAAGTGTTATACATCAAACAACCCTTTCATGATCCTCTTTGCATGCATACAAATAATACTTAGCCAAATACCAAACTTCCATAAGCTCTCTTGGCTCTCTATTGTTGCAGCCATTATGTCTTTTGCATATTCTTCCATTGGTCTTGGCCTCTCAATAGCTAAAGTAGCAACAGGTGGGGAACATGTAAGGACATCTTTGACTGGGGTGCAAGTTGGAGTGGATGTTACAGGATCAGAGAAAGTGTGGAGAACATTTCAAGCTATTGGTGACATAGCTTTTGCTTATGCTTATTCTAATGTGCTCATTGAGATACAGGATACCCTAAAATCAAGCCCTGCTGAGAACAAAGTGATGAAGAGAGCAAGTTTGATTGGTATATTGACCACAACCCTATTTTATGTGCTATGTGGGACCTTAGGCTATGCAGCATTTGGAAACGATGCACCAGGAAATTTCCTTACTGGGTTTGGCTTCTACGAGCCATTTTGGCTAATAGACTTTGCCAATGTCTGCATAGCTGTTCACTTAGTTGGGGCATACCAGGTTTTCTGCCAACCAATATTTGGTTTCGTAGAGAGTTGGAGCAAAGAAAAATGGTCTGAGAGCAAATTTGTAAACGTAGACTATGCTGTGAAGCTTCCACTATGTGGAACCTACAACCTAAACTTCTTCAGAATGGTGTGGAGAACAACATATGTTATCATTACTGCAGTAATAGCTATGTTGTTTCCATTCTTCAATGATTTCCTTGGCCTAATTGGTTCACTATCCTTTTGGCCATTAACGGTTTATTTCCCCATAGAGATGTATATTAAGCAGACCAAGATGCAAAAGTTTTCCTTCACTTGGACATGGCTCAAGATATTAAGCTGGGTCTGCTTGATTGTTTCTATTATCTCAGCTGCTGGCTCCATTCAAGGACTTGCTCAAGATCTCAAGAAATACCAGCCCTTCAAAGCTACCCAATAA 1449 0.4044 MNTEQFQRNSMYIETPDAYGNDGKNFDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPVVLFAFSFITYFTSTLLADCYRSPDPVNGKRNYTYSQVVRSILGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHQDKCYTSNNPFMILFACIQIILSQIPNFHKLSWLSIVAAIMSFAYSSIGLGLSIAKVATGGEHVRTSLTGVQVGVDVTGSEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPAENKVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLVGAYQVFCQPIFGFVESWSKEKWSESKFVNVDYAVKLPLCGTYNLNFFRMVWRTTYVIITAVIAMLFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQTKMQKFSFTWTWLKILSWVCLIVSIISAAGSIQGLAQDLKKYQPFKATQ* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1530 482 Pfam Transmembrane amino acid transporter protein 34 468 IPR013057 -
Lan3g1530 482 Gene3D Amino acid/polyamine transporter I 31 469 - -
Lan3g1530 482 PANTHER OS05G0424000 PROTEIN-RELATED 13 475 - -
Lan3g1530 482 MobiDBLite consensus disorder prediction 1 26 - -
Lan3g1530 482 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1530 Lan-Chr3 26747945 26754582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1530 7 480 Organic Solute Cotransporters AT5G49630 76.360 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1530 K24917 - gmx:100806335 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0926 15 18577049 18582301 Lan3g1530 3 26747945 26754582 LSH
Lan14g0721 14 14204045 14207779 Lan3g1530 3 26747945 26754582 LSH