Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1529 ATGACATCCTCTAAGAGACTGAATTCGGAGTCAAGTGGGAGAAGGAAAAGGAAAGGGAAACGACGAAAGTTGTCAAGTGGTTTTGATATCACTCCAGGGAGTGTTGTATTCCGTTTACTTTGTCCGGCTACGAGAATTGGTGGTGTTATAGGTAAAGGTGGTGCTGTTGTGACCCAAATTCGCAACGAAACCGGTGTGAAGCTTAAAATCGAGGAACCTGTTCCTCATTGCGACGAAAGAGTTATTACTATACTAGGTGATAGTAAAGACACTGAAGAGGATACTGAGCAGGGAAAGGAGGCTAATAATAATGAGGTCGATACGGATAGTAAAGAGAAGGATGATGAGATGAAAGATGATGGAGATGATAATGATGAGGATCAAGATACTGTTCCTATTGAAGATTCGAAGAGTGAGAAGGAGGACAAATTGTCTATTCTTAAAGCTCTATCTCTTCTTTTTGAGAGGATTGTTGGTCGAATAGAGGAGACAGCTGAAGGTGATAAAGAAAGTAATAGGTCCCCGGCTGCTGTTTTTAGGCTGCTTGTCCTTTCGAGCCAAGTTGGATGCCTTATTGGAAAGGGTGGTAGTGTGATAAAGCAAATGTCGGCTGATAGTGGGGCACAGATTCGGATCCTTCCTAAAGACAACCTTCCTGTTTGTGCATCGGCTTCTGATGAGCTAGTTCAGATCTCAGGGGATGTCGAAGCTGTCAGGAAAGCATTTCGATCAATTTCCAAACAGCTTTTGGAAAATCCGCCCCCGGATCATGAATCTATATCTGGCAATTCATCAGGGCTGCCATCTCATTCATTTGGTCAAGTCCCACCACACAACCGCAGCTTTGCTTCTGGATCTCATGATATTTCTTCTCCTGATCTGATTCCCAAATTTCATGATGGTGCCATCCTTGGTCGCATGAGGCCTTCACAGGAAGTGCTCACGTTTCGTTTATTGTGTCCGGCTGATAGGGTAGGAAGTATAATTGGCAAAGGCGGAGCAATAATAAAGGCTCTGCAGCAAGAAACAGCTTGTGATATTAAGGTTATGGAAGCTGTTCAAGACTCAGAGGAGTGCATTGTTGTCATATCTGGTCCAGCGCATCCAGATGATAGAATATCTCCTGTGCAAGAGGCTGTATTTCATGTGCATGGTAGAATAGCCAGGGCTATACCTGATCCCGAAGAGCATAGCATGTTAGCTAGACTTCTCGTTTCTTCTAATCAAATAGGTTGTCTCCTTGGTAAGTCTGGTTCCATCATAAATGAAATGAGGAAGTTATCAGGGGCCCATATCCGCATATTAGGCAAGGATAAGGTTCCAAGCTGTGCTTCAGAGGACGAAGAAGTAATTCAGATAAATGGAGAATTTGAGGCAGTGCACGATGCTCTTTTGCAAGTAACCAGTAGGTTAAGACATAATTTCTTTCGCAGCGCATTTCCATCAGGCAATTATCCTCCAAACTCTGTGTTTCTGGATCAGTTTCCTCGATTCCCGCCACACTTGGGAAGGCGTGGACTTTCACCTCCAGGGATATTTTCTAACAGGGGTCCTCCACCTCCACATGGGGGTTTTCCCCTTGATGACCGTCCTCCTTTTATGAATAATATACATAGACTGGGCATTCCTCCTCACATATCTGAAAATAGGCCTTGGGGCCCTCAGGGGCTACTCGAAGGTGGTGCACCTATGGGTGTTCCAGATTTTGCAGGAGGTCCTTCTAGAAGAATTCCCGACTTTGTTGGAGGGAGGCAACCAATCATCACAAGTACCACTGTTGAAGTAGTTGTCCCTCGAAAGTTGGTGCCTGTAATATATGGGGAGGATGGTGAATGCCTGAAACAAATACTTGAGATTTCGGATGCAAATATTACTATTACTGATCCAAAGCCTGGAGCTGTTGAAACCAAAATTATAATATCTGGAACTCCAGAGCAAACTCATGCGGCACAGAGTCTTATTCAGGCATTTGTGTTGAGCGAGAGGGAGTCTGGATGA 1998 0.4449 MTSSKRLNSESSGRRKRKGKRRKLSSGFDITPGSVVFRLLCPATRIGGVIGKGGAVVTQIRNETGVKLKIEEPVPHCDERVITILGDSKDTEEDTEQGKEANNNEVDTDSKEKDDEMKDDGDDNDEDQDTVPIEDSKSEKEDKLSILKALSLLFERIVGRIEETAEGDKESNRSPAAVFRLLVLSSQVGCLIGKGGSVIKQMSADSGAQIRILPKDNLPVCASASDELVQISGDVEAVRKAFRSISKQLLENPPPDHESISGNSSGLPSHSFGQVPPHNRSFASGSHDISSPDLIPKFHDGAILGRMRPSQEVLTFRLLCPADRVGSIIGKGGAIIKALQQETACDIKVMEAVQDSEECIVVISGPAHPDDRISPVQEAVFHVHGRIARAIPDPEEHSMLARLLVSSNQIGCLLGKSGSIINEMRKLSGAHIRILGKDKVPSCASEDEEVIQINGEFEAVHDALLQVTSRLRHNFFRSAFPSGNYPPNSVFLDQFPRFPPHLGRRGLSPPGIFSNRGPPPPHGGFPLDDRPPFMNNIHRLGIPPHISENRPWGPQGLLEGGAPMGVPDFAGGPSRRIPDFVGGRQPIITSTTVEVVVPRKLVPVIYGEDGECLKQILEISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVLSERESG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1529 665 Gene3D K Homology domain, type 1 588 662 IPR036612 GO:0003723
Lan3g1529 665 CDD KH-I 592 655 - -
Lan3g1529 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 312 399 IPR036612 GO:0003723
Lan3g1529 665 ProSiteProfiles Type-1 KH domain profile. 398 467 - -
Lan3g1529 665 MobiDBLite consensus disorder prediction 86 138 - -
Lan3g1529 665 ProSiteProfiles Type-1 KH domain profile. 34 102 - -
Lan3g1529 665 CDD PCBP_like_KH 178 246 - -
Lan3g1529 665 MobiDBLite consensus disorder prediction 249 286 - -
Lan3g1529 665 CDD PCBP_like_KH 402 468 - -
Lan3g1529 665 MobiDBLite consensus disorder prediction 86 117 - -
Lan3g1529 665 ProSiteProfiles Type-1 KH domain profile. 313 380 - -
Lan3g1529 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 395 477 IPR036612 GO:0003723
Lan3g1529 665 ProSiteProfiles Type-1 KH domain profile. 176 245 - -
Lan3g1529 665 CDD PCBP_like_KH 36 87 - -
Lan3g1529 665 MobiDBLite consensus disorder prediction 1 27 - -
Lan3g1529 665 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 4 526 - -
Lan3g1529 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 590 660 IPR036612 GO:0003723
Lan3g1529 665 Gene3D K Homology domain, type 1 176 253 IPR036612 GO:0003723
Lan3g1529 665 Gene3D K Homology domain, type 1 396 474 IPR036612 GO:0003723
Lan3g1529 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 170 253 IPR036612 GO:0003723
Lan3g1529 665 Gene3D K Homology domain, type 1 311 390 IPR036612 GO:0003723
Lan3g1529 665 Gene3D K Homology domain, type 1 33 101 IPR036612 GO:0003723
Lan3g1529 665 SMART kh_6 589 659 IPR004087 GO:0003676
Lan3g1529 665 SMART kh_6 397 472 IPR004087 GO:0003676
Lan3g1529 665 SMART kh_6 312 392 IPR004087 GO:0003676
Lan3g1529 665 SMART kh_6 33 107 IPR004087 GO:0003676
Lan3g1529 665 SMART kh_6 175 250 IPR004087 GO:0003676
Lan3g1529 665 CDD PCBP_like_KH 315 384 - -
Lan3g1529 665 Pfam KH domain 315 367 IPR004088 GO:0003723
Lan3g1529 665 Pfam KH domain 592 655 IPR004088 GO:0003723
Lan3g1529 665 Pfam KH domain 179 245 IPR004088 GO:0003723
Lan3g1529 665 Pfam KH domain 37 92 IPR004088 GO:0003723
Lan3g1529 665 Pfam KH domain 402 467 IPR004088 GO:0003723
Lan3g1529 665 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 4 526 - -
Lan3g1529 665 ProSiteProfiles Type-1 KH domain profile. 590 654 - -
Lan3g1529 665 MobiDBLite consensus disorder prediction 257 286 - -
Lan3g1529 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 91 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1529 Lan-Chr3 26740168 26748071 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1529 K21444 - gmx:100785136 915.22