Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1521 ATGGAAGAGGAAGAAGAGATTTTTGAGAGTAATCTGCAGCAACAACATGCTGTTGAAGAATTGAATTTCGATACTTATTTATCCTCTTTACACACATATCTTGGTGATGTTGAAGACACGCGTCACAGAACAGCTTTCTTGGATGCTGCTTCTGTATGCAATCTCCCTCTCTTTTCTCTTCCAGGAGTTGTGCTCTTTCCGGGAGCCACTCTTCCCCTGAGAGTTGTCGAACCCCCTTCCGTGGCTGCTGTTGAGAGAGCTTTGGCTCAAGTTGATGTTCCCTATACCATTGGTGTGATTCGAATTCACTGGGACACCACAAATCGTAGGATGAAATCTGCAAGCATTGGGACAACTGCAGAGATTCGACAATACGGGCGTCTAGCAGATGGTTCACTGAATGTGGTTACTCGTGGACAACAACGATTTCGCCTAAGACGGTGTTGGACAGATGCAGAAGGAGTGCCTTATGGAGAGATCCAAATTACTGACGAAGATGTACCATTGAGAACTCCACGGGATGCTTTTGGAAAATTAGTACCATTAAGTAATCGTTCCCGTAGCCATGCCATCTCACATATGTTATCTTCAAGAGCATTCTGGCCTCAATGGGTGTATCATATGTTCGACTCTTATTGCCTTGCAGAAAGAGCTGCAGACATGTGGAAGCAAATAGTTGGCGCTCCTAGCATGGATAGCCTTGTTAAGAAGCCTGATGCTTTATCATTTTATATCGCCAGTAAAATACCTGTGTCTGAATCTACAAGGCAGGAACTTTTGGATATTGACGGCATCACATATAGATTGCGCAGGGAAATTGAGTTACTTGCGAGCATTGATCTTATCCGATGTAAAATCTGCCAGACTATAATTGCAAAACGAAGTGACATGCTGGTGATGTCAAATGAGGGTCCTCTGGGTGCGTATGTGAATCTGGGTGGTTATGTGCACGAGATAATGACTCTTAACAAGGCAGATGGCATAACTCCTGTTGGGCCATCAGCTACAGAATATAGTTGGTTTCCTGGGTATGCTTGGACAATTGCAAAATGTGCTACATGTAGAACCCAACTGGGGTGGCTTTTTTCAGCCACTAAAAGAAAACTGAAACCCAGTTCCTTTTGGGGGATAAGGAGCTCTCAAGTTGCAGAAGAAATACGTAGAAACCGTTAA 1173 0.4399 MEEEEEIFESNLQQQHAVEELNFDTYLSSLHTYLGDVEDTRHRTAFLDAASVCNLPLFSLPGVVLFPGATLPLRVVEPPSVAAVERALAQVDVPYTIGVIRIHWDTTNRRMKSASIGTTAEIRQYGRLADGSLNVVTRGQQRFRLRRCWTDAEGVPYGEIQITDEDVPLRTPRDAFGKLVPLSNRSRSHAISHMLSSRAFWPQWVYHMFDSYCLAERAADMWKQIVGAPSMDSLVKKPDALSFYIASKIPVSESTRQELLDIDGITYRLRREIELLASIDLIRCKICQTIIAKRSDMLVMSNEGPLGAYVNLGGYVHEIMTLNKADGITPVGPSATEYSWFPGYAWTIAKCATCRTQLGWLFSATKRKLKPSSFWGIRSSQVAEEIRRNR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1521 390 Pfam ATP-dependent protease La (LON) substrate-binding domain 54 276 IPR003111 -
Lan3g1521 390 ProSiteProfiles CULT domain profile. 279 386 IPR034750 -
Lan3g1521 390 Gene3D Peptide methionine sulfoxide reductase. 276 390 - -
Lan3g1521 390 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 282 380 IPR004910 -
Lan3g1521 390 ProSiteProfiles Lon N-terminal domain profile. 55 278 IPR003111 -
Lan3g1521 390 Gene3D - 210 275 - -
Lan3g1521 390 Gene3D - 35 163 IPR046336 -
Lan3g1521 390 SUPERFAMILY PUA domain-like 54 276 IPR015947 -
Lan3g1521 390 SMART lon_5 54 278 IPR003111 -
Lan3g1521 390 CDD CRBN_C_like 282 382 IPR034750 -
Lan3g1521 390 PANTHER PROTEIN CEREBLON 13 382 - -
Lan3g1521 390 PANTHER CEREBLON 13 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1521 Lan-Chr3 26668555 26672353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1521 K11793 - gmx:100779918 325.479