Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1520 ATGACTAGCACATTGAAGGAGAATGATGGAGGTGTGAAGGATTTGTATGGTGAGGATAATGCCACTGAGGACCAGCTTATTACTCCATGGCATTTTTCTGTGGCCAGTGGCAGCACTTTGCTGAGAGATCCACGCTACAACAAGGGGCTTGCCTTTACAGAGATCGAACGAGATGCTCATTACTTGCGCGGACTTTTGCCTCCAGCTGTTTACAATCAGGATCTTCAGGAAAAGCGGGTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGGTACACAGCCTTGATGGATCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTGTTGATCGATAATGTTGAGGAACTACTTCCCGTTGTTTACACTCCAACGGTTGGAGAAGCCTGCCAGAAATATGGAAGCATTTATAAGCGCCCTCAGGGTCTCTACATCAGTTTGAAGGAGAAGGGCAAGATCCTTGAAGTGCTAAAAAACTGGCCGGAGAAGACCGTTCAAGTTATTGTTGTTACTGATGGTGAGCGTATATTGGGACTCGGAGATCTTGGTTGCCAGGGAATGGGTATTCCTGTTGGGAAACTTTCTCTCTATACTGCATTAGGAGGTGTTCGTCCTTCATCGTGCTTGCCTATCACCATCGATGTTGGCACAAACAATGAGAAGTTGCTGAATGACGAGTTTTACATTGGGCTCAAACAAAAGCGGGCTACGGGGAAGGAATATGAGGAGCTTCTAGAGGAGTTTATGAGTGCAGTTAAGAAGAACTATGGGGAGAAAGTTCTTGTACAGTTTGAAGATTTCGCAAATCACAATGCATTCACTCTGCTGGAAAAATACAGTTCATCTCATCTTGTATTTAATGATGATATACAGGGTACTGCATCTGTGGTATTAGCAGGAGTGATTGCTTCCCTGAAATTAATTGGTGGGACTTTAGCTGACCACACTTTCTTATTCTTGGGAGCCGGAGAGGCTGGAACTGGTATAGCAGAGTTGATAGCTCTTGAGATTTCTAAACGGACAAAAGCACCGGTGGAAGAGACCCGCAAGAAGATTTGGCTCGTGGACTCGAAGGGACTTATCGTTAGCTCTCGTCTTGAATCACTTCAGCACTTCAAAAAGCCTTGGGCTCATGAGCATGAACCTGTAAAGACGCTTGTAGATGCAGTCAAGGCAATCAAGCCGACCGTATTGATCGGAACATCTGGAGTGGGGAAGACATTCACCAAGGACGTGGTTGAAGCCATGGCATCCTTCAATGAGAAACCTCTTATTTTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACTGCTGAAGAAGCTTATACATGGAGCAAGGGACGAGCGATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCGGGACAGGGAAACAATGCTTACATATTTCCTGGTCTGGGTTTGGGTTTGATAATGTCTGGTGCAATCCGCGTGCGGGACGAGATGCTCTTAGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCAGAGGAGAACTATGATAAGGGGCTGATATACCCTCCATTCACAAACATCAGAAAGATATCAGCTAGCATTGCTGCTAATGTTGCAGCTAAGGCATATGAACTTGGTCTAGCTTCTCATCTACCTAGACCCAAGGATCTTCTCAAATATGCAGAAAGTTGCATGTACAGTCCAGGCTACAGAAGCTACCGTTAA 1731 0.4535 MTSTLKENDGGVKDLYGEDNATEDQLITPWHFSVASGSTLLRDPRYNKGLAFTEIERDAHYLRGLLPPAVYNQDLQEKRVMHNLRQYEVPLHRYTALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYKRPQGLYISLKEKGKILEVLKNWPEKTVQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGKEYEELLEEFMSAVKKNYGEKVLVQFEDFANHNAFTLLEKYSSSHLVFNDDIQGTASVVLAGVIASLKLIGGTLADHTFLFLGAGEAGTGIAELIALEISKRTKAPVEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLVDAVKAIKPTVLIGTSGVGKTFTKDVVEAMASFNEKPLIFALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKVFVPGQGNNAYIFPGLGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISASIAANVAAKAYELGLASHLPRPKDLLKYAESCMYSPGYRSYR* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1520 576 CDD NAD_bind_1_malic_enz 292 570 - -
Lan3g1520 576 Pfam Malic enzyme, NAD binding domain 292 544 IPR012302 GO:0051287
Lan3g1520 576 SMART Malic_M_2 292 545 IPR012302 GO:0051287
Lan3g1520 576 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 19 291 IPR046346 -
Lan3g1520 576 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 292 575 IPR036291 -
Lan3g1520 576 Gene3D - 35 289 IPR037062 GO:0004471
Lan3g1520 576 PANTHER MALIC ENZYME-RELATED 8 576 - -
Lan3g1520 576 PANTHER MALIC ENZYME 8 576 - -
Lan3g1520 576 PIRSF ME 7 576 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 ProSitePatterns Malic enzymes signature. 288 304 IPR015884 GO:0004471
Lan3g1520 576 Gene3D - 290 576 - -
Lan3g1520 576 PRINTS Malic enzyme signature 107 131 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 167 196 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 203 225 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 263 281 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 288 304 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 319 335 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 PRINTS Malic enzyme signature 422 438 IPR001891 GO:0004470|GO:0004471
Lan3g1520 576 Pfam Malic enzyme, N-terminal domain 101 281 IPR012301 GO:0004471
Lan3g1520 576 SMART malic_2 101 282 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1520 Lan-Chr3 26663345 26667982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1520 K00029 - gmx:100818219 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0732 14 14296637 14301598 Lan3g1520 3 26663345 26667982 LSH