Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1517 ATGTCTTCCTCCGTCGAGACGGGGATGATGGAGCCACTAACGTCGGGGGCAAGCAACCGTATAATCCCAATTCTGAAAGCGCTTAGGGCTTCTTCAATTTTTGTCTACACATTCTTCCTCTCATTCCTCCTTTTCATTCTCCCTCGCCGTCGCCGCCTCTCACCGACGTCGGAGCTGGCGCCTCCGTCGCCGAAGAAGAGTTTGAAGAGGCGGTGGTTGATTAGGGAAGAGGAGGACACGTTTAGGAGAAGAGCGTTGGCACAAGATGTTGGAATGGGACCTGATGACCGGTGCTGCCGGTGGAACACTTCTATCTTTTATGGAATCAGAAACAATGCTCTCTTTTGCCGTTCATGGTTTCCGGTCACCGGTCATCTTAAGGGCATTCTGATCATCATTCATGGGCTTAATGAACACAGTGGAAGATATGCCGATTTCGCAAGGCAGTTAACGTCACGCCACTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGCTTGCATGGTTATGTTCCTTCTCTTGATCATGTCGTTGCAGACACAGGAGCTTTCTTGGAAAAGATTAGATCAGAGAATCCAGGGATACCATGCTTTCTCTTTGGTCACTCTACTGGAGGGGCTGTGGTTTTGAAAGCAGCTTCCCTCCCTCACATTGAAGTAATGGTGGAAGGAATTATACTAACCTCACCTGCTTTGCGAGTCAAGCCAGCTCATCCCATTGTTGGTGCTGTTGCTCCAATTTTTTCTCTGGTAGCTCCTAAGTTCCAATTTAAAGGAGCAAACAAAAGGGGAATTCCAGTTTCCAGGGACCCAGAGGCTTTGTTGGCAAAGTACTCTGATCCTCTGGTCTACACAGGACCTATAAGGGTCCGAACCGGCCATGAAATACTCCGGATATCTTCTTACTTAACGCGGAACTTCAAGTCTGTGACAGTGCCATTCTTTGTCCTGCATGGAACTGCTGATAAGGTAACTGATCCACTGGCCTCAGAAGATCTATACAACAAGGCAGCTTCAGAGTTCAAAGACATAAAGCTTTACGATGGCTTCTTGCACGACCTTCTGTTCGAACCTGAGCGTGAAGAGATTGCTCGGGACATTATCAACTGGATGGAGAAGAGATTATTTGCTATTTGA 1149 0.4778 MSSSVETGMMEPLTSGASNRIIPILKALRASSIFVYTFFLSFLLFILPRRRRLSPTSELAPPSPKKSLKRRWLIREEEDTFRRRALAQDVGMGPDDRCCRWNTSIFYGIRNNALFCRSWFPVTGHLKGILIIIHGLNEHSGRYADFARQLTSRHFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSENPGIPCFLFGHSTGGAVVLKAASLPHIEVMVEGIILTSPALRVKPAHPIVGAVAPIFSLVAPKFQFKGANKRGIPVSRDPEALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFFVLHGTADKVTDPLASEDLYNKAASEFKDIKLYDGFLHDLLFEPEREEIARDIINWMEKRLFAI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1517 382 Gene3D alpha/beta hydrolase 100 379 IPR029058 -
Lan3g1517 382 SUPERFAMILY alpha/beta-Hydrolases 112 379 IPR029058 -
Lan3g1517 382 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 64 379 - -
Lan3g1517 382 Pfam Serine aminopeptidase, S33 125 363 IPR022742 -
Lan3g1517 382 PANTHER PHOSPHOLIPASE-RELATED 64 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1517 Lan-Chr3 26637115 26642292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1517 10 299 Acyl Lipid Metabolism Gene Families AT5G11650 70.270 1.92e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1517 - K01054 gmx:100816265 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1517 3 26637115 26642292 Lan3g1517 3 26637115 26642292 ECH
Lan15g1275 15 20947345 20948310 Lan3g1517 3 26637115 26642292 LSH
Lan14g0733 14 14308757 14311829 Lan3g1517 3 26637115 26642292 LSH