Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan3g1515 | ATGCCGGAGGCAATGGCGGACGCCGGCAATTTTTCAAACTCCGGCAACCTATCACATAAGGTAATAGCCGTCGCTGCGGGTGAAGCACACACTCTCATTCTTACTGGGGATGGTAGTGTGTATTCTTGGGGTAGAGGAATGTTTGGAAGGCTTGGACTTGATTCAGAAAAAGATGAGATTTTTCCAGTTCAGGTTAAGTTTCAGAACCCTAATGGAGATACTCTCAAAATTGTTGCAATTGCAGCTGGTGCTTATCATAGTCTTGCTCTTTCAGATGATGGATCTGTTTGGTGCTGGGGTTATAATCTCTATGGTCAACTTGGTATCAATGGAGAGGACTCCAATGACATAAATTATACTGGCCGAGATTATTCTCTAGTGCCCTGCTTGCTGAATAAGTTTCTTGAGTTGCATGTGCCTGATTCTTCAACAGATACGCCTGAAGCGGAAGGCAAAGAATCACTAAAGATATGTGCCGTGAAAGCAGGAGGCATGATGTCTCTGGCTATTGATAATCATGGGGCGCTATGGATATGGGGAAACTGCCCACAAAAAGTCAAGGAAGGCGAGTTATCTCTTGTAAGCAACTTCACTCCAACACCAGTGTGGGATTTTCACGGTCACACAGTCGTCAAGGTTGCATGTGGAAACGAGCATATTGTAGCACTGGTTAGTGCTGGAGAATCATACAATGGCGAAGATCTAGTGTGCTACTCTTGGGGTTGTAACAGCCATGGCCAATTAGGCTTAGGGGATAGGGATAGCAGGTCGCGTCCAGAAGTTGTGAAAACATTTGATAAGGAGTCCCCCTGGGCAGTTTACGAGGTAGCATGTGGTGCCTTTCATACTGCTTTGCTCACTCACAAAAAGAAACCTCATGATACATTAGAAAGCACATGTTGGACTTTTGGTCTTGGGGATAATGGGCAACTTGGGCATGGAACAACACAAAGCGCATTATTTCCTACACCTGTTAATGAATTGCCCCAAAATGTGTTCTTTATTTCAGTTGACTGTGGATTGTTTCATACAAGTGCCGTTTCCTCAGCCGGGGATGTCTGGTCATGGGGAATGGAGAAGGGTCTTGGTTTATGCCCTGATGCTAGTCATTCAGAAGCAGATTCTGGTGATGCCCTCTTACCCCTTCTTATCTCACGAATGCCGTATCAACCTCAATTTCCGGATCCTGTTCAAGTAGCATGTGGCGCTGCACATACTGTTATTGTTGCACAGGAGGGATACAAGATATGGTCATGGGGTAGGGGAAGGAGTGGAGCTCTTGGAAATGGTAGGGAAGTGGATTTTTACATTCCCACCATAGTTCTATGGCCTCCACTGAAAGAAGATTTCAAGGAAGAGGAATTAAAGAGCGGTGATGAGCAAGATAAGGTTAAAGAAAAAGAGACCGAAGCGATAACAGAAACAGATGAGAAACTATCATCTGCATTGAATGAGGTGAAGCTGCTTCAAAGCAAGCTATCAACAATAGAAAAGTACGCCGGTATTCTTCATGGTTGCGTTTTTGGAAAACCTTTTGTCGAACAAGATATCCCAGCTTCATTGCGGAATTCGGGTTCATTTGACATAGCAAAAGAATGGGAGAACATGTTAGAGGCAGCAGATCATAGAAACCTAATGAGGTTGGAGATGTTCTACAGGGACATGCATGCTGGTGTGAAAGATAAACTAATGAAGAGAAGGATAAAGGAAATTATAACTGAGTGCCTCCAATCTTCAGAGGTGAAAAAGTAG | 1752 | 0.4418 | MPEAMADAGNFSNSGNLSHKVIAVAAGEAHTLILTGDGSVYSWGRGMFGRLGLDSEKDEIFPVQVKFQNPNGDTLKIVAIAAGAYHSLALSDDGSVWCWGYNLYGQLGINGEDSNDINYTGRDYSLVPCLLNKFLELHVPDSSTDTPEAEGKESLKICAVKAGGMMSLAIDNHGALWIWGNCPQKVKEGELSLVSNFTPTPVWDFHGHTVVKVACGNEHIVALVSAGESYNGEDLVCYSWGCNSHGQLGLGDRDSRSRPEVVKTFDKESPWAVYEVACGAFHTALLTHKKKPHDTLESTCWTFGLGDNGQLGHGTTQSALFPTPVNELPQNVFFISVDCGLFHTSAVSSAGDVWSWGMEKGLGLCPDASHSEADSGDALLPLLISRMPYQPQFPDPVQVACGAAHTVIVAQEGYKIWSWGRGRSGALGNGREVDFYIPTIVLWPPLKEDFKEEELKSGDEQDKVKEKETEAITETDEKLSSALNEVKLLQSKLSTIEKYAGILHGCVFGKPFVEQDIPASLRNSGSFDIAKEWENMLEAADHRNLMRLEMFYRDMHAGVKDKLMKRRIKEIITECLQSSEVKK* | 584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 351 | 412 | IPR000408 | - | |
| Lan3g1515 | 583 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 276 | 286 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 39 | 55 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 77 | 90 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 96 | 112 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 213 | 229 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 340 | 358 | IPR000408 | - | |
| Lan3g1515 | 583 | PRINTS | Chromosome condensation regulator RCC1 signature | 409 | 430 | IPR000408 | - | |
| Lan3g1515 | 583 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 213 | 223 | IPR000408 | - | |
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 94 | 173 | IPR000408 | - | |
| Lan3g1515 | 583 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 7 | 583 | - | - | |
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 174 | 226 | IPR000408 | - | |
| Lan3g1515 | 583 | Coils | Coil | 465 | 492 | - | - | |
| Lan3g1515 | 583 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 80 | 90 | IPR000408 | - | |
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 298 | 350 | IPR000408 | - | |
| Lan3g1515 | 583 | MobiDBLite | consensus disorder prediction | 453 | 472 | - | - | |
| Lan3g1515 | 583 | SUPERFAMILY | RCC1/BLIP-II | 273 | 441 | IPR009091 | - | |
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 38 | 93 | IPR000408 | - | |
| Lan3g1515 | 583 | SUPERFAMILY | RCC1/BLIP-II | 16 | 328 | IPR009091 | - | |
| Lan3g1515 | 583 | Gene3D | - | 6 | 233 | IPR009091 | - | |
| Lan3g1515 | 583 | Gene3D | - | 234 | 476 | IPR009091 | - | |
| Lan3g1515 | 583 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 238 | 286 | IPR000408 | - | |
| Lan3g1515 | 583 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 37 | 90 | IPR000408 | - | |
| Lan3g1515 | 583 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 93 | 170 | IPR000408 | - | |
| Lan3g1515 | 583 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 300 | 347 | IPR000408 | - | |
| Lan3g1515 | 583 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 351 | 408 | IPR000408 | - | |
| Lan3g1515 | 583 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HERC2-LIKE PROTEIN | 7 | 583 | - | - | |
| Lan3g1515 | 583 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 235 | 289 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan3g1515 | Lan-Chr3 | 26624048 | 26627435 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan3g1515 | - | - | gmx:100815199 | 907.516 |