Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1479 ATGGCAGGGCTGAATTTTGAAGCTGAATATGGTGACAGCCATGATATTCTGAAGGCATTATCAGATGAAGGTGTTGAGTTTATTTTATCTTGTAAAGGGAAGGTACCCTTGTCAGAATGCAATGGGAAAATCATGTGCCTATTTTTCTCTGCAAACTGGTGCAGACCTTGCAGAGGATTCATTCCTCACTTGGTTGAACTTTATGACACACTTAGAAAGAGAGGCGTAAGTCTAGAGATCGTATTCGTCTCCTTTGATCGCGAGGAGGATGGATTTAATGAACACTTGAAGAGTATGCCATGGCTAGCCGTCCCATTTGATGTAAATTTGCATAGAAGATTGATTGACAGATACCGAGTTGATCGAATCCCATCATTCATTCCATTATACTCAGATGATGACATGACTGTTCAAGACTTGATAGGGTGCATTGAGGATTATGGTGCCAATGCATTTCCTTTCACAAGGAAGCGGCACGAGGAATTGAAAGCCATAGATAAAAGGAAACGCGACGAAGCAAACTTGGAAGAATTATTGGCAGGGGAAGGCTGCAACTTTCTCACATCTGGAGATGATATAAAGGTACCTGTATCTGAACTAACTGATAAAACTATAGGCCTATACTTTAGTGCTTACTGGTCTCCTCCGTGCCGTTCCTTCACTATCCAACTCACCGATGTGTACAACAATCTTAATGCTGCAAAAAACAGTCACTGCTTCGAGATTGTTTTAATCTCAACAGATAGAGACCTTAAGGAATTCAATGTCAACAGAAGTAGCATGCCTTGGCTTGCTATTCCATATGAGGATAGAACAAGGCATGATCTTTGTAGAATCTTCGATATAAAAGGAATTCCAGCTTTGGTTGTCATCGGACCAGATGGCAAAGTGATTAGTGAGAATGGCAAGTTTATAGTCTCCTCATATGGTGCTGATGCTTATCCGTTTACCGAGTCGCGGATTAGGGACCTAGAAGCAGCTCTGAGAAGCCAAGGAGAGACTTTGCCTCAACAAGTTGAAGATATTAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCTTATGTATGTGATTTCTGTAAAAAGCAAGGGAAGTTCTGGGCTTTCTCTTGTGATGTTTGTGACTATGATCTTCATCCAAGTTGTGTAGAAAAGCTTCACAAAGACTAA 1173 0.4109 MAGLNFEAEYGDSHDILKALSDEGVEFILSCKGKVPLSECNGKIMCLFFSANWCRPCRGFIPHLVELYDTLRKRGVSLEIVFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYRVDRIPSFIPLYSDDDMTVQDLIGCIEDYGANAFPFTRKRHEELKAIDKRKRDEANLEELLAGEGCNFLTSGDDIKVPVSELTDKTIGLYFSAYWSPPCRSFTIQLTDVYNNLNAAKNSHCFEIVLISTDRDLKEFNVNRSSMPWLAIPYEDRTRHDLCRIFDIKGIPALVVIGPDGKVISENGKFIVSSYGADAYPFTESRIRDLEAALRSQGETLPQQVEDIKHEHVLKLDMAKAYVCDFCKKQGKFWAFSCDVCDYDLHPSCVEKLHKD* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1479 390 SUPERFAMILY Cysteine-rich domain 334 385 IPR046349 -
Lan3g1479 390 SUPERFAMILY Thioredoxin-like 187 299 IPR036249 -
Lan3g1479 390 Gene3D Glutaredoxin 22 158 - -
Lan3g1479 390 SUPERFAMILY Thioredoxin-like 34 132 IPR036249 -
Lan3g1479 390 CDD TryX_like_TryX_NRX 185 316 IPR045870 GO:0004791
Lan3g1479 390 ProSiteProfiles Thioredoxin domain profile. 177 326 IPR013766 -
Lan3g1479 390 PANTHER THIOREDOXIN 1 386 - -
Lan3g1479 390 Gene3D Glutaredoxin 182 318 - -
Lan3g1479 390 PANTHER NUCLEOREDOXIN 3-RELATED 1 386 - -
Lan3g1479 390 Pfam C1 domain 343 384 IPR004146 -
Lan3g1479 390 ProSiteProfiles Thioredoxin domain profile. 1 149 IPR013766 -
Lan3g1479 390 Pfam Thioredoxin-like 42 127 IPR012336 -
Lan3g1479 390 Pfam Thioredoxin-like 203 297 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1479 Lan-Chr3 26329035 26331990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1479 K17609 - gmx:100778160 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1479 3 26329035 26331990 Lan3g1479 3 26329035 26331990 ECH
Lan14g0765 14 14560239 14563235 Lan3g1479 3 26329035 26331990 LSH