Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1455 ATGAATCCATTATGCTGCATTGCTCCAGTTTCAATCGATCGTGACCGTACAACCCCCGTCGTAGCTAAACCGCTTCCGTTAGGTCTCGATTCATCGATAAGAACCGTTAGCTACGCTTCAAAATCGAGCTTATCAGCTCAAGATTCATCTCTAGATGATGAAGAAGACGTGGAAGGTCGTGATTCGAAGGTTAATGGCGGTGTTGCTGGGAGTGTGGCTGGGATTTTGTATAAATGGGTGAACTATGGTAAAGGATGGAGATCGAGGTGGTTCGTGCTTGAAGATGGTGTTCTTTCTTATTACAAGATTCATGGACCTGATAAGATCTTGGTCAAGGATCGGAGCATGAGAGTGATTGGTGATGAATCGGTGAGGTTTTTGAAGAAATCGAATTGGAATAGTGTGAATCGCGGTGGTAGTGGTGGTGGTAGTAGTGTTAATAAGCAATGCAAACCGTTTGGTGAGATACATTTGAAGGTTTCTTCAATTCGTGCAAGTAAATCCGATGATAAGCGACTTTCCATTTTTACTGGAACAAAAACTCTTCACTTGCGTTGTGTATCCAGAGATGACAGAGCCATGTGGATTGAGGCTCTGCAGTCGGCAAAAGACCTTTTTCCTAGAGCTCTATCAAGTAGTGATCTTTCAACCTCAGAAGATATTGTAGTTTCAACAGAGAAGCTACGATCACGATTGTCACAGGAAGGCATAAGTGAAACTGTTATTAGTGACTGTGAGTCTATTATGCTCTCAGAAGTTTCTTATCTTCAAGGCAAGTTGAAGTTTCTTCATCAGAAACATCATATGTTGCTGAACACCTTAAAACAGCTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTGGTGGATGAAACAAAGGAACGCGAGTCGTATTGTGGACAAGCTAGAAGGTTTAGCGATTTCTATTCTGTAATGTCGGAGGGCAGTGCTACTGATTCTGTAGCAGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACTGATGATGAAGATGGAGCATATTTTGATACGAATGAGTTCTTGTCTTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGGGAAAGTACAGGAAATGCCAATATTTACAACAAAGATTTTATTCTTTATGATGGCTTATATGGGTTTGAGAAGGAGATCAAAGATGTAAGTTATCCATATGTTCAAAGAAGAGATAACTTACCAGAGCCGAAAGAGAAAGAGAAGCCTCTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTCGAAGACCTGGAGTATTCATACCTTGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCTGGCTATGCATCAACTGAAGGTCGACAGTGCAAACCTTTCAATCCCTTACTTGGAGAGACCTATGAAGCCGACTATCCAGATAAAGGGCTCAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCGATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGTTGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAATTCTGGGGACGTTCTATTCAGTTAGATCCAGTGGGTGTCCTCACCCTACAATTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAACATCATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGTGCATCAAGGGAAGTGGCAACTACTCCTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGACCGAAACCCACATCAGGTACATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATAGGGAAGTGGGATGAAGCAATGTACTACGTCCTCGGGGATCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGGCAACTGTGCTACCAAGACAAGATACAACCTCTCTCCTTTTGCAATATCCTTAAATGAAATAGTGCCTGGCTTATCAGAGAAGTTGCCTCCAACCGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAGTATGAGCTGGCAAATGCAGAGAAGCTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAGGAAAGGGGATGGAAGCCGAGATGGTTTCAGAAGGACGAGGATGGTTCTTACCGATACAAAGGTGGCTACTGGGAAGCGCGAGAAAATAATAACTGGGACGAAATCCCTGACATATTTGGACAGAGTTGTGATTTGCCTTCATGCTCTGAAGAGATTGTGTCCTAG 2379 0.4203 MNPLCCIAPVSIDRDRTTPVVAKPLPLGLDSSIRTVSYASKSSLSAQDSSLDDEEDVEGRDSKVNGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILVKDRSMRVIGDESVRFLKKSNWNSVNRGGSGGGSSVNKQCKPFGEIHLKVSSIRASKSDDKRLSIFTGTKTLHLRCVSRDDRAMWIEALQSAKDLFPRALSSSDLSTSEDIVVSTEKLRSRLSQEGISETVISDCESIMLSEVSYLQGKLKFLHQKHHMLLNTLKQLETEKIELETTVVDETKERESYCGQARRFSDFYSVMSEGSATDSVADNESQDGADVETDDEDGAYFDTNEFLSSDALRSASYRSRESTGNANIYNKDFILYDGLYGFEKEIKDVSYPYVQRRDNLPEPKEKEKPLGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMCIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERGNCATKTRYNLSPFAISLNEIVPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWKPRWFQKDEDGSYRYKGGYWEARENNNWDEIPDIFGQSCDLPSCSEEIVS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1455 792 MobiDBLite consensus disorder prediction 316 336 - -
Lan3g1455 792 Pfam Oxysterol-binding protein 413 766 IPR000648 GO:0008289
Lan3g1455 792 Coils Coil 260 294 - -
Lan3g1455 792 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 782 IPR000648 GO:0008289
Lan3g1455 792 Pfam Pleckstrin homology domain 74 201 - -
Lan3g1455 792 ProSiteProfiles PH domain profile. 69 204 IPR001849 -
Lan3g1455 792 SUPERFAMILY PH domain-like 73 211 - -
Lan3g1455 792 Coils Coil 720 740 - -
Lan3g1455 792 Gene3D - 498 664 - -
Lan3g1455 792 Gene3D - 69 206 IPR011993 -
Lan3g1455 792 SMART PH_update 70 206 IPR001849 -
Lan3g1455 792 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 782 - -
Lan3g1455 792 Gene3D - 709 780 - -
Lan3g1455 792 CDD PH_ORP_plant 72 208 - -
Lan3g1455 792 SUPERFAMILY Oxysterol-binding protein-like 407 779 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1455 Lan-Chr3 26100107 26106572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1455 K20456 - gmx:100817856 1404.04