Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1445 ATGTTCAAACAAATATTTAGTAAACTTCCTAGAAAATCTTCATCAAAAGGTGGTTCTTCTGATACTAATAGTGGAAGAAGCCATGGTGGTGTTAAAAGCAATGATCTTGCTACAAAATTGGCGGGTTTGGGTTCGGCTTCTGTTTCGCAACCCAATCATGGTAATATTAACAACAATAGAGCTCAATTACCAATTGGTGTGAATGAAAATCAAAACCCCAATGGGAATTTGAGTTTCAGTTCTTATGAAGCATTGCCTGCATTCAGGGCTGTTCCGAATTCCGAGAAGAATGCGTTGTTTATCAACAAGCTGAAGATGTGTAGTGTTGTGTTTGACTTCATTGATGCTACGAAGAACCTAAAGGAGAAGGAGATTAAGAGGCAGACTTTGGTGGAGCTCGTGGATCACGTGACTTCGGCTAATGCGAAATTCTCAGAGAGTGTGATACAGCAAGTTGTGAGAACGGTGTCCGCGAATATATTTAGGATGCTTAGTCCTCAGCTGCGCGAGAACAAGCCTATTGATGGCGTTGAGTTGGATGAGGAGGAGCCTTCGATGGATCCTGCGTGGCCTCATTTGCAGATTGTGTACGAGCTTTTTCTGCGATTTGTGGCCTCGCCCGAGCTGGACGTGAAGGTAGCTAAGAGGTTTATTGATCAATCCTTTGTTTTGAGGCTGCTTGATTTGTTTGACTCTGAAGATCCTAGAGAAAGGGAGTACTTGAAAATGACCCTTCACCGAATCTATGGGAAGTTTATGGCGCATCGCCCTTTTATCAGGAAAGCAGTCAATAACATATTTTTTAATTTTATTTTCGAGACTGAGAAGTATAATGGTATTGCTGAATTCCTTGAATTTCTGGGGAGCATCATTAATGGTTTTGCACTGCCTTTGAAAGAAGAGCATAAACTGTTTCTTGTCCGTGTGTTGATTCCCCTTCACAAACCAAAGAGCTTGGCAATGTATCATCATCAGTTATCTTATTGCATTACTCAGTTTGTCGAGAAAGACTGCAAGCTTGCTGATACCATTATTAGGGGATTATTGAAGTACTGGCCGATAACGAATAGTTCAAAGGAAGTTATGTTCTTGGGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCTCCAGAATTCCAGCGTTGTATGATGCCATTATTTCGCCGAATTGCACATTGTTTGAATAGCCCCCATTTTCAGGTTGCAGAAAGAGCTTTGTTCTTGTGGAACAATGATCACATTGTGAACTTAATCAGACAAAATTGCAAAGTGGTACTGCCGATAATCTTTCCTGCTTTGGAGAAAAATACTAGAAGTCATTGGAACCAGGCTGTCCATAGTTTGACTTTAAATGTGCAGAAGATTTTCAACGATTTGGATCCCGATCTATCCAAGGAATGCTTGCTAAAGTTTGAGGAAAATGAATCAAAGAAAGATGAAATAAACGAAGATCGTGAAGCCACTTGGAAGCGCTTAGAGGAGCTTGCCACAAAGAGAGCTGCAAATAGCGAAGCTGTGCTTATCGGGAGAGTACTCACTCACAACTCTGCAGGTTAG 1557 0.413 MFKQIFSKLPRKSSSKGGSSDTNSGRSHGGVKSNDLATKLAGLGSASVSQPNHGNINNNRAQLPIGVNENQNPNGNLSFSSYEALPAFRAVPNSEKNALFINKLKMCSVVFDFIDATKNLKEKEIKRQTLVELVDHVTSANAKFSESVIQQVVRTVSANIFRMLSPQLRENKPIDGVELDEEEPSMDPAWPHLQIVYELFLRFVASPELDVKVAKRFIDQSFVLRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKAVNNIFFNFIFETEKYNGIAEFLEFLGSIINGFALPLKEEHKLFLVRVLIPLHKPKSLAMYHHQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMMPLFRRIAHCLNSPHFQVAERALFLWNNDHIVNLIRQNCKVVLPIIFPALEKNTRSHWNQAVHSLTLNVQKIFNDLDPDLSKECLLKFEENESKKDEINEDREATWKRLEELATKRAANSEAVLIGRVLTHNSAG* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1445 518 Gene3D - 92 495 IPR011989 -
Lan3g1445 518 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 516 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan3g1445 518 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 516 - -
Lan3g1445 518 SUPERFAMILY ARM repeat 97 492 IPR016024 -
Lan3g1445 518 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 85 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan3g1445 518 PIRSF PP2A_B56 3 516 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan3g1445 518 MobiDBLite consensus disorder prediction 8 31 - -
Lan3g1445 518 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1445 Lan-Chr3 26025906 26031344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1445 K11584 - gmx:100811438 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0218 14 2499406 2504055 Lan3g1445 3 26025906 26031344 LSH