Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1435 ATGCCACCATCAGAAAAATTGCTTGGTAACAAACTTCCAATAATTCGAATACCAGGAGATGGTAGATGTTTATTTAGATCAGTTGTGTATGGTGCATGTCTCAGAAAAGGAGAGCCATCTCCAAGTATCAACAAGCAAAAGGAACTTGCAGATGAGCTCAGAGCAAAAGTTGTGGATGAATTCATCAAGAGGAGGGAAGATACTGAGTGGTTTGTTGAGGGTGATTTTGAAACCTATACAGTACAAATGAGAAAGCCTCACATATGGGGAGGAGAGCCTGAACTTTTCATGTGTTCACATGTTTTACAGATGCCAATAACAGTGCTCATGCAGGATAAGAATTCAAGTAGCCTTAAAGTTATAGCTGAATATGGTTTGGAGTATGATAAGGATAATAATCCTATTAGAGTTATTTATCATGGTTATGGTCACTATGATGTGTTGAAGGGTTCAACTGGTTATTATACACAATCTTAA 477 0.3753 MPPSEKLLGNKLPIIRIPGDGRCLFRSVVYGACLRKGEPSPSINKQKELADELRAKVVDEFIKRREDTEWFVEGDFETYTVQMRKPHIWGGEPELFMCSHVLQMPITVLMQDKNSSSLKVIAEYGLEYDKDNNPIRVIYHGYGHYDVLKGSTGYYTQS* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1435 158 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Lan3g1435 158 Gene3D - 4 154 - -
Lan3g1435 158 PANTHER OS09G0487700 PROTEIN 14 149 - -
Lan3g1435 158 SUPERFAMILY Cysteine proteinases 6 149 IPR038765 -
Lan3g1435 158 ProSiteProfiles OTU domain profile. 12 151 IPR003323 -
Lan3g1435 158 PANTHER OTU DOMAIN CONTAINING PROTEIN 14 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1435 Lan-Chr3 25936893 25939066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1435 K18342 - gmx:100792132 268.085