Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1421 ATGTCTGCTACTGTGGAAGCTGTCTCTTCTACAAAAAAAGATGTTATTTCATTCAACTCTCATTTAGATGAAGAGCTTGAAAACAAAGGAATGAACAATAAGGTTGGTGTTGTGGAACAAGACTCTGATGATGTTGAGACAGAAGAGTTGGAATATGACAAAGAATTGGACCTTGGTCCTCAGGTTTCTCTCAAGGAACAGCTTGAGAAAGATAAGGATGATGAAAGTTTGAGGAAATGGAAGGAACAACTTCTTGGAAGTGTTGATATATCTAATGTTGGAGAAAGTAAAGATCCAGAAGTGAAGATCATGAGTCTGACAATTATATGCTCAGATAGGCCAAACATTATCCTTCCAGTTCCATTTGGTATTGATCCTAAGAAGAGTCTCTTCATCCTTAAGGAAGGAAGCACTTGCCGCATGAAATTCACCTTCACTGTCTCAAACAACATTGTTTCTGGTCTCAAATACACCAATGTTGTTTGGAAAACTGGTGTTAGAGTGGACAGTAGGAAAAAAATGTTGGGAACTTTTAGCCCACAGGAGGAACCATATACATATGAATTGGACGAAGAAACTACACCTTGTGGCATGTTTGCTAGGGGAACCTATGCAGCAAGAATTATGTTTGTAGATGATGATAAAAAATGTTACATGGATGCAAGTTACTACTTTGAAATTCAGAAGAATTGGGCAACACCCTTATGA 708 0.3799 MSATVEAVSSTKKDVISFNSHLDEELENKGMNNKVGVVEQDSDDVETEELEYDKELDLGPQVSLKEQLEKDKDDESLRKWKEQLLGSVDISNVGESKDPEVKIMSLTIICSDRPNIILPVPFGIDPKKSLFILKEGSTCRMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMLGTFSPQEEPYTYELDEETTPCGMFARGTYAARIMFVDDDKKCYMDASYYFEIQKNWATPL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1421 235 MobiDBLite consensus disorder prediction 29 52 - -
Lan3g1421 235 PRINTS RHO protein GDP dissociation inhibitor signature 151 167 IPR000406 GO:0005094|GO:0005737
Lan3g1421 235 PRINTS RHO protein GDP dissociation inhibitor signature 168 183 IPR000406 GO:0005094|GO:0005737
Lan3g1421 235 PRINTS RHO protein GDP dissociation inhibitor signature 210 227 IPR000406 GO:0005094|GO:0005737
Lan3g1421 235 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 13 233 - -
Lan3g1421 235 SUPERFAMILY E set domains 45 231 IPR014756 -
Lan3g1421 235 Pfam RHO protein GDP dissociation inhibitor 44 230 IPR000406 GO:0005094|GO:0005737
Lan3g1421 235 Gene3D Coagulation Factor XIII, subunit A, domain 1 53 233 IPR024792 -
Lan3g1421 235 PANTHER RHO GDP-DISSOCIATION INHIBITOR 13 233 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1421 Lan-Chr3 25842709 25844484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1421 K12462 - gmx:100806852 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1421 3 25842709 25844484 Lan1g1708 1 30999998 31002272 PCT
Lan1g1708 1 30999998 31002272 Lan3g1421 3 25842709 25844484 PCT