Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1420 ATGCCCATCTTCTCTGCAACTCTGGGCTCTTCCACTTCATTCTTTTACCATTCTTCTATTCCTTTCATCCAAACTTCTTTCACTTTCCCTAAATGCCCTTACAAGTGTTCTCTCTCTAATAGTATTAATACAGAAATTCAACCAAATCAAGACTCTGCAATCCTTCAACGCCCTCTCGTTACTGATATTGATCCTAACCAACTCGCTATTCGTCAGGCTCGGAGATCATCAGATTGGAAGGCTGCAAATGCATATAAAGAGAGTTCAATAATATACAATGGAAGGGTTGAAGAGTATAACAGTGGAGGCTTATTGATTCGCTTTTTTACTATTTTGGGTTTTCTTCCTTTCCCTCAGTTGAGCCCATCTCATGCATCTAAAGAACCTCACAAAAGTATCCAAGACATTGCAAAAAGTTTGGTTGGTTCAGTCTTATCCATGAAGGTAATTGTGGCCGACGAGGATAACAGGAAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCTAAATTTTCTGGAAGGGTCAAGGTAGGAGACATTTTTGAAGCAAGAGTTGGTTCTGTTGAGGATTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCGCCTTACTGGACTAGTACACATCTCAGAAGTGTCATGGGATCTAGTTCATGATGTAAGAGACATCTTAACAGAAGGTGATAAGTTGAGGGTTAAAGTTATCAATGTTGATAGAGAAAAATCAAGGATTAAACTGTCAATTAAACAGTTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGATTCATCAGATTCTGATTCTTTGAGTGATGAGGATAGCAGTGTTATTGAGCCTCTTCCAGGACTTGAAACAATCCTTGAAGAGCTACATAAGGAAGATGGCATATTTGATGCAAGAATCAGTCGTCAAGGGTTTGAAAAACGCGTTGTCTCACCAGACTTGCAGCTTTGGCTTTCCAATGCGCCTCCATCAAACCAAAGGTTTACTCTCCTTGCTAGAGCTGGAAGACAGGTGCAGGAGATACACCTAACTACATCCCTTGATCAAGAAGGTATCAAAAGGGCATTACAACGAGTATTGGAGCGTGTCCCCTGA 1125 0.4071 MPIFSATLGSSTSFFYHSSIPFIQTSFTFPKCPYKCSLSNSINTEIQPNQDSAILQRPLVTDIDPNQLAIRQARRSSDWKAANAYKESSIIYNGRVEEYNSGGLLIRFFTILGFLPFPQLSPSHASKEPHKSIQDIAKSLVGSVLSMKVIVADEDNRKLIFSEKEAAWSKFSGRVKVGDIFEARVGSVEDYGAFVHLRFPDGLYRLTGLVHISEVSWDLVHDVRDILTEGDKLRVKVINVDREKSRIKLSIKQLEEDPLLETLDKVIPQDDSSDSDSLSDEDSSVIEPLPGLETILEELHKEDGIFDARISRQGFEKRVVSPDLQLWLSNAPPSNQRFTLLARAGRQVQEIHLTTSLDQEGIKRALQRVLERVP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1420 374 Pfam S1 RNA binding domain 175 252 IPR003029 GO:0003676
Lan3g1420 374 ProSiteProfiles S1 domain profile. 178 252 IPR003029 GO:0003676
Lan3g1420 374 SUPERFAMILY Nucleic acid-binding proteins 176 265 IPR012340 -
Lan3g1420 374 ProSiteProfiles S1 domain profile. 89 164 IPR003029 GO:0003676
Lan3g1420 374 SUPERFAMILY Nucleic acid-binding proteins 91 164 IPR012340 -
Lan3g1420 374 Gene3D - 172 254 IPR012340 -
Lan3g1420 374 Gene3D - 79 171 IPR012340 -
Lan3g1420 374 PANTHER OS03G0844900 PROTEIN 52 374 - -
Lan3g1420 374 Coils Coil 237 257 - -
Lan3g1420 374 SMART S1_6 87 164 IPR022967 -
Lan3g1420 374 SMART S1_6 176 252 IPR022967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1420 Lan-Chr3 25835687 25840345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1420 - - gmx:100798303 516.924