Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1417 ATGAAGCAGATGATGATGATGGTTCCTTCCAAATCATCTCGTAAGAACAAATCATCTTCCAAAGAAAATCATCCTCCTTCATCAGATCCTAATGTCCTTATTCATCCCAAACCTTCTCCTCTCAAATCCAATCATTCATTACCTCCAAGACCTCCTTCTTCTTCTAAGCGCACCAAGCTCACCACGGATCTCAACAACTCTCCTACCTCCGATTCCGGCGTCAAGGTGGTTGTAAGAATGAGGCCATTGTGCAAGGACAAGGATGAAGAGGATCCTATAGTACAAAAGATTTCTACCAATTCTTTGTCAATTAACGGCCACACTTTCACCTTTGATTCCGTTGCTGATGTGGATGCTACTCAGGTCGATATTTTCGACCATGTTGGGGTTCCTGTGGTTGAGAATTGCTTGGCTGGTTTCAATAGTTCAGTCTTTGCTTATGGACAGACTGGGAGTGGAAAGACTTATACAATGTGGGGTCCTGCCAATGCTTTGTTGGAAGAAAATGTGGAAATTGATCAACAAGGTCTCACACCCCGCGTTTTTGAACTACTCTTTTCACGCATAAATGAAGAGCAAACTAAGCATTCTGACAAACAACTCAACTATCACTGTCACTGCTCTTTTCTTGAGATATACAATGAGCAAATCACTGATTTGTTAAATCCAAATCAAAAAAACCTTCAGATCAGAGAAGATGTCAAATCTGGTGTCTATGTTGAAAATCTTACAGAGGAGAATGTAGCCACAATGAAGGATGTGACTAGGCTTTTAATAAAGGGATTATCAAACAGGAGAATAGGTGCAACCAGTATAAATTCTGAGAGTTCTCGCTCACATACTGTTTTCACTTGTGTTGTTGAATCACGGTGCAAGAGCACATCAGATGGTGTGAGCAGATTTAAAACAAGTAGAATCAATCTTGTTGATCTAGCTGGTTCGGAACGACAAAAGTTAACTGGTGCTGCTGGAGAGCGTTTGAAGGAAGCTGGCAACATTAATAGATCACTCTCACAACTTGGGAATCTGATAAATATTCTTGCGGAAGTTTCTCAAACAGGAAAGCAGCGGCATATACCATACAGAGATTCCAGGTTGACATTTTTATTGCAGGAGTCTCTTGGAGGAAATGCAAAATTAGCAATGATTTGTGCTATTTCCCCAGCACAAAGTTGTAGGAGTGAAACTTTCAGTACACTAAGATTTGCTCAGCGTGCCAAAGCTATCAAGAACAAGGCAGTTGTTAATGAAGTTATGCAGGACGATGTGAACCACTTGAGACAAGTGATACGGCAACTCAGGGATGAACTGCATCGAATTAAAGAAAATGGTTGCAACCCAGTGGAGTCAAGTGGAGGTCATTCAGCAGCTTGGATCCGAAGAAGCTTGAATATATTACAGTCTAGCCTCAATCGACCACAGCCATTATCTTGCGTTGACGAAGATGGTGATGAAGAGATGGAGATTATTGATGAGGAAGGGGTTGAGAACCCTGATGTAGTTTTATGCAATGCCAATACGCCAAGTAATTGTAATATTTTAGTAGAAAATGATGAAGAAATGAACATTGATGACCAAGATTTGGCTGAACCCTGTGAGGCCAACAATATTCCTAGTTGTTCTGGCAGCAAATTTCCAAATGAAGAACCATCCCTTGCAATGGGAAGAAGCAGTTTCTCTTGTCCTGTGGGTGAATCTGATATCAGTTTTTCAGCCCCAGATGCTTCCATCGGTTCTCCTAGTGCCACAATGAGTTGCGTCTCCCCTGCTAGCCTCACCATAGTTAAGTGTGATTCATCTCCAGTCCTTATATCCCCACCCCCCAGTGTTTCTCCTAGAATCAGCAGCAGCAGGAAAAGTTTGAGGACCTCATCAGGGTTGTCTCCTTCTGAGAATGGTCTTCATGTTGAAAGTGATTTGGGCATAAAACATGGCAATAAAAAACCCACATCTACTGCCTTTTCTAGTCAGACAGCTCCAGAATTCCTTACAAAAACTGAAGACTTAGCAGCAAGCATACGCCATGGTCTTGAAATCATTGATAGCCACCACCGTAATAATGCTGCTTTGAGGCGGTCATCATATCGATTTTCATTGCGACCAAGAGAGTCCAGACTAACTTTTCCAGCAGGAAAAGTTGATATGGGCGTGCAAACTTTTCTTGAGGATTTTGTGAAAGAAGAATCTGTTTTGTTCACCTGCAATAACTGTAAAAGCAGAATGCAAGTTGATAGTAGTGAGAATGACAATGACTCAAACTTACAGTTAGTACCTCATGACAACAGCTCAAACTTACAGTTAGTACCTCATGACAACAACTCAAAGTTACAGTTAGTACCTGTTGATTTCTCTGAGACTGCTGATAAGCCGAAGAAGCAAGTTCTGAAAGCAGTAGAGAAGGTTTTGGCAGGATCCATAAGGAGAGAAATGGCTCTTGAGGAGTTCTGTGCAAAGCAAACTTATGAGATAATGCAGCTTAATCGCTTGGTGCAACAGTACAAGCATGAGAAGGAATGTAATGCCATAATAGCAAAGACAAAGGAAGATAAAATCCTTCGCCTTGAGAGCCTCATGGATGGTGTTTTACCCACTGAGGATTTCATGGATGAAGAGCTTGTGGCCCTTACCCATGAACACAAGCTTTTGAAGGACAACTATGAGAACCATCCAGAAGTTTTGAAGATGGCGATAGAGTTAAAAAGAGTACAAGATGAATTAGAAGAATATCAGAGTTTCTACAAATTGGGGGAGAGGGAAGTGTTAATGGAAGAGATACAGAGTTTAAGAAGCCAACTTCAATTTTATATTGACTCTTCATCTGCATCAGCAGCAAGGATGCAAAACCCATTATTGCAATTGACTTATTCATCTACACCCAATTTGGCAGCAACACTCACTGCCATTCCAGAGTCAACAGAGGAGAGGGATGAGACATATGAAACTCCAGCATCAACTGAGGCTGAGGCAAATGAAATTCCAGCATCGGCCGAGGAGAGTGCTGAAGTAAAACTTGAACAAGAAAGAATTAGATGGACTGAGGCAGAAAGTAGATGGATTTCTCTTTCTGAAGAACTGAGAGCTGAGCTCGAAGCTAACAGGTCGCTAGCTGAAAAAAGGAAGCGAGAATTAGATGCTGAGAAGAAATGTAATGAAGAACTTGAGGAAGCCATGCACATGGCTATAGAAAGCCATGCCCGACTTTTAGAACAATATGCAGATTTGCAAGAAAAACATATCCAATTATTTGCTAGGCATAGAAACATCCAGGATGGAATTGAGGATGTCATGAAAGCATCTTCCAGAGCAGGAGCAAGAGCTGCAGAGTCTAAGCTCATAAATACCCTTGCTGCAGAAATTTCAGCATTAAAAGCAGAAAGAGAAAAGGAAAGGCGAATCCTAAGGGATGAAAATAGAGGGCTTCAGGCCCAACTGAACGATACTGCTGAAGCAGTGCAAGCTGCTGGTGAACTACTTTTGCGGCTTAAAGAAGCAGAAGAAGGTATTACTACTGCACAGAAAAGGGCTATGGATGCAGAGCAGGAGGCTGCAAAGGCTTACAAACAAATTGATAAGTTGAAGAACAAATATGAGAAGGAGATTAACACACTTAATCAGCTCATTGTAGAGACTCGCTTGCCGAATGAATCGATACGGCCAGCTTATGTTGATGATGTTGTCATGCCCATTTATGATGAGCCACACAGTGTTAATGACCCATTTGAGATCTTAAATAATGCAGATGGTGGTGAACTTGCAAAACTAGCAGAATCATCATGGTTCTCGGGTTATGACAGATGCAATATATAA 3807 0.4153 MKQMMMMVPSKSSRKNKSSSKENHPPSSDPNVLIHPKPSPLKSNHSLPPRPPSSSKRTKLTTDLNNSPTSDSGVKVVVRMRPLCKDKDEEDPIVQKISTNSLSINGHTFTFDSVADVDATQVDIFDHVGVPVVENCLAGFNSSVFAYGQTGSGKTYTMWGPANALLEENVEIDQQGLTPRVFELLFSRINEEQTKHSDKQLNYHCHCSFLEIYNEQITDLLNPNQKNLQIREDVKSGVYVENLTEENVATMKDVTRLLIKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSTSDGVSRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMICAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNHLRQVIRQLRDELHRIKENGCNPVESSGGHSAAWIRRSLNILQSSLNRPQPLSCVDEDGDEEMEIIDEEGVENPDVVLCNANTPSNCNILVENDEEMNIDDQDLAEPCEANNIPSCSGSKFPNEEPSLAMGRSSFSCPVGESDISFSAPDASIGSPSATMSCVSPASLTIVKCDSSPVLISPPPSVSPRISSSRKSLRTSSGLSPSENGLHVESDLGIKHGNKKPTSTAFSSQTAPEFLTKTEDLAASIRHGLEIIDSHHRNNAALRRSSYRFSLRPRESRLTFPAGKVDMGVQTFLEDFVKEESVLFTCNNCKSRMQVDSSENDNDSNLQLVPHDNSSNLQLVPHDNNSKLQLVPVDFSETADKPKKQVLKAVEKVLAGSIRREMALEEFCAKQTYEIMQLNRLVQQYKHEKECNAIIAKTKEDKILRLESLMDGVLPTEDFMDEELVALTHEHKLLKDNYENHPEVLKMAIELKRVQDELEEYQSFYKLGEREVLMEEIQSLRSQLQFYIDSSSASAARMQNPLLQLTYSSTPNLAATLTAIPESTEERDETYETPASTEAEANEIPASAEESAEVKLEQERIRWTEAESRWISLSEELRAELEANRSLAEKRKRELDAEKKCNEELEEAMHMAIESHARLLEQYADLQEKHIQLFARHRNIQDGIEDVMKASSRAGARAAESKLINTLAAEISALKAEREKERRILRDENRGLQAQLNDTAEAVQAAGELLLRLKEAEEGITTAQKRAMDAEQEAAKAYKQIDKLKNKYEKEINTLNQLIVETRLPNESIRPAYVDDVVMPIYDEPHSVNDPFEILNNADGGELAKLAESSWFSGYDRCNI* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1417 1268 Coils Coil 1112 1150 - -
Lan3g1417 1268 MobiDBLite consensus disorder prediction 1 72 - -
Lan3g1417 1268 Gene3D Kinesin motor domain 64 443 IPR036961 -
Lan3g1417 1268 PANTHER KINESIN-LIKE PROTEIN KIN-12B 51 508 - -
Lan3g1417 1268 PANTHER KINESIN-LIKE PROTEIN KIN-12B 764 1268 - -
Lan3g1417 1268 PANTHER KINESIN-LIKE PROTEIN KIN-12B 565 763 - -
Lan3g1417 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 441 IPR027417 -
Lan3g1417 1268 MobiDBLite consensus disorder prediction 48 72 - -
Lan3g1417 1268 PANTHER CENTROMERE PROTEIN E 51 508 - -
Lan3g1417 1268 PANTHER CENTROMERE PROTEIN E 764 1268 - -
Lan3g1417 1268 PANTHER CENTROMERE PROTEIN E 565 763 - -
Lan3g1417 1268 ProSitePatterns Kinesin motor domain signature. 304 315 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan3g1417 1268 Pfam Kinesin motor domain 82 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 PRINTS Kinesin heavy chain signature 270 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 PRINTS Kinesin heavy chain signature 305 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 PRINTS Kinesin heavy chain signature 359 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 SMART kinesin_4 71 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 Coils Coil 1019 1070 - -
Lan3g1417 1268 ProSiteProfiles Kinesin motor domain profile. 73 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g1417 1268 Coils Coil 416 443 - -
Lan3g1417 1268 MobiDBLite consensus disorder prediction 970 1000 - -
Lan3g1417 1268 MobiDBLite consensus disorder prediction 606 659 - -
Lan3g1417 1268 MobiDBLite consensus disorder prediction 609 632 - -
Lan3g1417 1268 Coils Coil 1161 1209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1417 Lan-Chr3 25805772 25813230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1417 47 448 Miscellaneous Gene Families AT5G06670 35.990 8.65e-62 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1417 K10400 - gmx:100785790 1769.59