Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1411 ATGATGTCTTCTCCACCAGACACAAGCAAGACCATAAAACTAGAACGTTACAATTCTTACATCAGAAGACTTAGCAGCACAAAGCTTCTTAATGCTTCTTCCAAGCTTCTCTTTCGCACCACTCTCCTCATAGCACTCATCCTCGTTTTCTTCTTCATTTTCAACTACCCTCCACTCTCTTCATCGGAAAATAACAACAACAACCACCACCACCACCGCCAGCTCCACACGCGCACCAATTTCCTCTCCTCTGCGTTCGGCGGTGGAGCAGCATGGGAGAAGAAGGTCCGTCATTCCTCCACTCCTCGGCGACCCAACGGTATGTCGGTGCTGGTGACCGGTGCGGCTGGGTTTATCGGGAGTCACTGCTCGTTGGCACTAAAGAAGCGTGGAGACGGGGTGGTTGGATTTGATAACTTTAATAGTTATTATGATCCATCGTTGAAGCGTGCACGAGAAGCGCTTCTTAAACAGCATGAAATATATATTGTTGAAGGAGATTTGAATGATGCGTTGTTGCTGTCTAAACTCTTTGATGTTGTGCCCTTTACTCACATCCTCCACTTAGCAGCTCAAGCAGGTGTTCGTTATGCTATGCAGAACCCACAATCCTACATCAAATCCAACATTGCTGGATTCGTGAACCTTCTAGAAGTTGCAAAAAGTGTGAAGCCTCAACCTGCTATTGTTTGGGCATCTTCTAGTTCCGTGTATGGACTCAACACTGATAATCCATTCTCCGAGCTTCATAGAACTGATCAACCAGCTAGTCTCTACGCTGCAACAAAAAAGGCTGGCGAGGAAATAGCACACACTTATAATCATATTTATGGTCTTTCTCTCACAGCATTGAGATTCTTCACTGTTTATGGCCCTTGGGGGAGACCCGACATGGCTTACTTCTTTTTCACCAAGGATATCCTTCACGGCAAAACCATTGATCTCTATCAAACACAGGATGGTAAGGAGGTGGCGCGTGACTTCACATACATAGATGACATAGTAAAGGGGTGTCTGGGGGCGGTAGACACGGCGGAGAAGAGCACCGGGAGTGGCGGAAAGAAGCGGGGTCCAGCGCAGCTAAGAATATACAACCTAGGAAACACATCACCAGTGGGAGTGGGGAAAATGGTTGGAATAATAGAAGGATTGTTGAGCACTAAGGCAAAGAGGCACGTGATCAAGATGCCTTCAAATGGTGACGTACCATATACACATGCTAATGTCACTTTGGCTTATAAGGATTTCGGATACAAACCCACCACTGATTTAGCTTCGGGCTTGAAGAAGTTTGTTAAATGGTACGTTGGTTATTATGGGATTCAACCAAGGCTTAAAAAGGATAACCATGTTCAACCCCAAGATTCTTCTTGA 1374 0.4578 MMSSPPDTSKTIKLERYNSYIRRLSSTKLLNASSKLLFRTTLLIALILVFFFIFNYPPLSSSENNNNNHHHHRQLHTRTNFLSSAFGGGAAWEKKVRHSSTPRRPNGMSVLVTGAAGFIGSHCSLALKKRGDGVVGFDNFNSYYDPSLKRAREALLKQHEIYIVEGDLNDALLLSKLFDVVPFTHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVAKSVKPQPAIVWASSSSVYGLNTDNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTALRFFTVYGPWGRPDMAYFFFTKDILHGKTIDLYQTQDGKEVARDFTYIDDIVKGCLGAVDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVGVGKMVGIIEGLLSTKAKRHVIKMPSNGDVPYTHANVTLAYKDFGYKPTTDLASGLKKFVKWYVGYYGIQPRLKKDNHVQPQDSS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1411 457 PANTHER UDP-D-GLUCURONATE 4-EPIMERASE 6-RELATED 2 448 - -
Lan3g1411 457 PANTHER EPIMERASE-RELATED 2 448 - -
Lan3g1411 457 PRINTS Nucleotide sugar epimerase signature 136 152 - -
Lan3g1411 457 PRINTS Nucleotide sugar epimerase signature 326 341 - -
Lan3g1411 457 PRINTS Nucleotide sugar epimerase signature 361 376 - -
Lan3g1411 457 PRINTS Nucleotide sugar epimerase signature 401 418 - -
Lan3g1411 457 Gene3D - 111 422 - -
Lan3g1411 457 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 441 IPR036291 -
Lan3g1411 457 Pfam GDP-mannose 4,6 dehydratase 111 430 IPR016040 -
Lan3g1411 457 Gene3D - 287 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1411 Lan-Chr3 25746874 25749371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1411 2 448 Miscellaneous Gene Families AT3G23820 79.333 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1411 K08679 - zju:107422361 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0010 15 82627 96493 Lan3g1411 3 25746874 25749371 LSH