Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1397 ATGGATGACACTTTTCCACGCTCTTCTCCATCTTCCCCACTGCTACTTCTTTTCTTCTTTTCGGTTTTGTTTCATGATGCTCTTGTCATACCAGCAGCGGACATTTCAACAACAACAACAACTAGTCAAAGAGCATCTCCTGCACTCTATGATTGCAATCAATGCATTGGCAAACAAGATATTTCTACTACTACACTCCTCCGCAACAATTACCCTCATCATCAAAAGGAGGAGGACATTGATATAATTGCTGCATACAGTGATGCATATGGCCATGTTCGACTTGCTAGATTGAAAATGAGCCACTTATCTCATTCCTGGATTTGGGAAAACCCTACTACTCATGCAACAAACAACACCTCATCCTCCCAGGATTTGATTGAACGCAGCCCCAACCATGAAACAATACTCAAAACTCCACGTTCCTCGACAATGACTCCAGTCAAGATCAAGCGCCGGATAATGCGGGAAGAAAGAAGGAAAGTTCGTGCATCTGAACTTATGCAACAAGACAAAGAAACTGACAATCGCATCATATCAGCAGCAATTCAACGCTCTGAAGGATTTGACATCACTATCAAGGGAAAGTATAGTATATGGAGGAGAGAATATGAAAACCCAAATTCTGGTTCAACTCTAAAACTGATGCGAGATCAAATAATAATGGCCAAAGCATATGCCAACATTGCCAAGTCTAACAATAAACCTCTTCTTTACGATGCTCTTGTCAAACACTCCAGAGAAAGTCAACAAGCTATCGGAGAAGCAACTAATGATTTTGAGCTTCACCTTGGAGCACTTGATCGAGCAAAAGCTATGGGTCATGTTCTCTCTATGGCGAAAGACCAACTTTATGACTGCCTTTTGGTAGCAAGGAAATTAAGGGCGATGCTTCAATCAACTGAAAATAGTGTGAATATACTGAAGAAGAGGAGTGCATTCTTGATTCAGCTGGCTGCAAAAACAGTGCCTAGACCATTGCATTGCCTTCCCCTGCAACTTGCAGCGGATTATTACCTGCAAGACTATCATAAGAAACGAAATTTTGACAAAGAAAAGATTGAAGATCCCTCTCTTCACCACTATGCTATCTTTTCTGATAATGTACTGGCTACATCTGTGGTTGTTAATTCCACCGTGCAGAATGCAAAGGAACCTGAGAAGCATGTATTCCATATAGTAACTGATAAATTAAATTTTGCAGCAATGAGAATGTGGTTTCTCATCAACCCTCCTTCTAAGGCAACCATTGAAGTTCAGAATATTGATGATTTCAAATGGCTGAATTCCTCATATTGTTCTGTTCTACGTCAACTTGAATCCGCAAGAATTAAGGAATATTACTTTAAAGCTAATCATCCCTCCTCCCTCTCTGTTGGATCTGACAATCTAAAATACAGAAATCCCAAATATTTGTCAATGCTGAATCACCTAAGGTTCTACCTTCCTGAAGTTTATCCCAAATTAAATAAAATTCTATTCTTGGATGATGACATTGTAGTGCAGAAAGATTTAAGTCCTCTATGGTCAATTGATCTCAGAGGGATGGTGAATGGTGCAGTAGAGACATGCAAGGAGAGCTTCCATAGGTTTGATAAATACCTCAACTTTAGTAATCCACTTATCTCCAATAATTTCAGTCCTGAAGCTTGTGGCTGGGCATATGGCATGAATGTTTTTGACTTGAAGGAGTGGAAGAAACGAAACATCACTGGAATATATCACCGGTGGCAAGATATGAATGATGATAGAACCCTCTGGAAGCTTGGAACCTTACCCCCAGGACTAATCACCTTTTATAACCTCACCTACCCTTTAGATCGAGGCTGGCATGTTTTGGGACTTGGTTATGATCCTGCTCTGAACCTAACAGAGATAGAGAACGCTGCTGTCATTCACTACAATGGAAACTACAAGCCGTGGTTGAATCTTGCTGTTTCCAAGTATAAATCGTACTGGTCCAGATATGTTATGTTTGATAATCCATATCTTAGACTATGCAACCTTAGTGAATAG 2016 0.4018 MDDTFPRSSPSSPLLLLFFFSVLFHDALVIPAADISTTTTTSQRASPALYDCNQCIGKQDISTTTLLRNNYPHHQKEEDIDIIAAYSDAYGHVRLARLKMSHLSHSWIWENPTTHATNNTSSSQDLIERSPNHETILKTPRSSTMTPVKIKRRIMREERRKVRASELMQQDKETDNRIISAAIQRSEGFDITIKGKYSIWRREYENPNSGSTLKLMRDQIIMAKAYANIAKSNNKPLLYDALVKHSRESQQAIGEATNDFELHLGALDRAKAMGHVLSMAKDQLYDCLLVARKLRAMLQSTENSVNILKKRSAFLIQLAAKTVPRPLHCLPLQLAADYYLQDYHKKRNFDKEKIEDPSLHHYAIFSDNVLATSVVVNSTVQNAKEPEKHVFHIVTDKLNFAAMRMWFLINPPSKATIEVQNIDDFKWLNSSYCSVLRQLESARIKEYYFKANHPSSLSVGSDNLKYRNPKYLSMLNHLRFYLPEVYPKLNKILFLDDDIVVQKDLSPLWSIDLRGMVNGAVETCKESFHRFDKYLNFSNPLISNNFSPEACGWAYGMNVFDLKEWKKRNITGIYHRWQDMNDDRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIENAAVIHYNGNYKPWLNLAVSKYKSYWSRYVMFDNPYLRLCNLSE* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1397 671 Pfam Glycosyl transferase family 8 330 644 IPR002495 GO:0016757
Lan3g1397 671 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 362 661 IPR029044 -
Lan3g1397 671 PANTHER GALACTURONOSYLTRANSFERASE 3-RELATED 58 670 - -
Lan3g1397 671 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 58 670 IPR029993 GO:0047262
Lan3g1397 671 Coils Coil 291 311 - -
Lan3g1397 671 CDD GT8_like_1 360 657 - -
Lan3g1397 671 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 664 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1397 Lan-Chr3 25599469 25602649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1397 78 671 Glycosyltransferase AT4G38270 67.320 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1397 K13648 - gmx:100781749 1063.91