Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1383 ATGACTAATAATATTATTATTGTGGTCACTCTTCTGTTTTGGATTGTTACTATTGTGGCTGCAAAAGGACGTGCACCCGCTGTGAGGCTTCATAAGAAACATTCTGTTACTGGTATTCAGAATGTTAGTTATGATGGTAGGTCTCTCTTGATCAACAACCAACGCCACCTTCTCTTTTCCGGTTCCATTCATTACACTAGAAGCACCCCTCAGATGTGGCCTAACCTTCTTGATAAGGCAAGACATGGTGGTTTGAATGTCATTCAAACCTATGTCTTTTGGAATGCTCATGAGCCTCAGAAAGGCAAGTGGAATTTTGAAGGCAACTATGATCTTGTCAAGTTCATTAAGCTTATTCAAGAGAAAGGAATGTTTGCAACCCTCAGGGTTGGCCCTTTCATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGGCATCATATTCCGCTCTAACAATGAGCCATTTAAGCAACACATGGAAGCATATGTGACAAAGATCATAAACATGATGAAAGCTGAGAAGCTGTTTGCATCCCAAGGAGGGCCAATAATTTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGATGAAGATGGTCCCAGTTATGTCCAATGGGCTGCAAATATGGCAGTGGCACAAAACATTGGAGTTCCATGGATCATGTGCAAGCAGAAGGATGCACCTGATCCAGTTATCAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCACTGGCCCAAACAAACCTTACAAGCCTGCCATATGGACTGAGAACTGGACAGCTCAGTACAGAGTTTTTGGTGATCCCACTTCCCAAAGATCTGCTGAAGATATTGCTTTCTCAATTGCCCGCTTCTTCTCCAAGGATGGCATCTTGGTCAACTACTATATGTACCATGGTGGAACAAACTTTGGAAGGACAAGTGCTGCATTCACCACAACCAGGTATTACGATGAAGCACCACTTGATGAATTTGGTCTACAAAGAGAACCAAAATGGAGCCACTTGAGGGATGCACACAGGTCTTTGAACCTATGCAAGAAGGCTCTACTCACTGGGAAAACCAGTGTACAAAGGCTGAATGAGTTTCATGAGATTAGAGTGTATGAGAAGCATGAGAGTGACATATGTTCTGCTTTCATCACTAACAACCACACCATTGAAGCAGCCACCATTAACTTCAGAGGTAAACAATTCTTTGTGCCACCACATTCCATTAGTGTCCTCCCTGATTGCAAGACTGTGGTCTTCAACACTCAACAGATTGCTTCACAACATAATGCAAGGAACTTCAGGAGGTCAACTCTTGCAAACAATCACAAATGGGAGGTGTTTTCTGAGAGCATCCCATCAAATGACCGAGTACCAGTCAGCCAAAAACTCCCTGCAGAACTTTATAGTTTGCTTAAAGACACCACAGATTATGCATGGTACACCACTAGCTTCAACTTGGGTGCACAAGACTTGCCAAAGAATGGAGCCGCACCGGTTCTTCGTATTATGAGTCTTGGACATTCATTGCTTGCATTTGTGAATGGAGTATATATTGGATCTAATCATGGAACACACGAAGAGAAATCTTTTGAATTCCAGAAACCTGTAAACTTCAAGATTGGGAAGAACAGTATTTCCATCTTGGCTAGCACAGTTGGACTACCTGACAGTGGAGCATACATGGAACACAGGTACGCTGGACCCAAATCCATAAGCATCCTTGGTCTCACTACAGGAACAATTGAACTCACTTCCAATGGTTGGGGTCATAAGGTTGGTCTGAAAGGTGAGAAGTTAAAGATCTTCAGTGAGGAGGGATCAAAGACAGTAAAGTGGAGAGCTGTTGTTGGAAATGCACCAGCTCTGTCATGGTTGAAGACAAGATTCAGCACTCCAGAGGGAAGGGATCCTGTGGCCATAAGAATGAATGGTATGGGAAAAGGAATGATTTGGGTGAATGGCCAAAGCTTAGGTAGACACTGGATGAATTTCCTCTCCCCACTTGGAAAGCCTACTCAGTCAGAATACCACATTCCAAGATCATACCTCAACCCAAAAGACAACTTGCTTGTTGTATTGGAAGAAGAGAGTGCAAATCCATCACAGGTTGAGATTCTCACTGTTGACAGAGATGTTATATGCAGCTTCATCACAGAGAACCATCCACCCAACGTGGATTCATTTGCATCAAAAGACATGAAATTTCATTCTATTATGGAAAGTGTGAGACCAGAAGCTACACTCAAGTGTTCCAACTTCAAGAAGATAGTGGCTGTTGAGTTTGCAAGCTATGGTAACCCTTCAGGTTTTTGTGGAAACTTCATATTAGGGAACTGCAATGTGGCTGCTGCAAAGAGTGTTGTTGAGGAGCAATGCATAGGAAAATATTCATGCAAGGTTGCATTGGAAAGCTTTAGCAAGAATGGAAATGTGTGCCCAGGTTTGGAGAAGACACTAGCAATACAAGTGAGGTGTTCTCATTAG 2514 0.4288 MTNNIIIVVTLLFWIVTIVAAKGRAPAVRLHKKHSVTGIQNVSYDGRSLLINNQRHLLFSGSIHYTRSTPQMWPNLLDKARHGGLNVIQTYVFWNAHEPQKGKWNFEGNYDLVKFIKLIQEKGMFATLRVGPFIQAEWNHGGLPYWLREVPGIIFRSNNEPFKQHMEAYVTKIINMMKAEKLFASQGGPIILAQIENEYNHIQLAYDEDGPSYVQWAANMAVAQNIGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPAIWTENWTAQYRVFGDPTSQRSAEDIAFSIARFFSKDGILVNYYMYHGGTNFGRTSAAFTTTRYYDEAPLDEFGLQREPKWSHLRDAHRSLNLCKKALLTGKTSVQRLNEFHEIRVYEKHESDICSAFITNNHTIEAATINFRGKQFFVPPHSISVLPDCKTVVFNTQQIASQHNARNFRRSTLANNHKWEVFSESIPSNDRVPVSQKLPAELYSLLKDTTDYAWYTTSFNLGAQDLPKNGAAPVLRIMSLGHSLLAFVNGVYIGSNHGTHEEKSFEFQKPVNFKIGKNSISILASTVGLPDSGAYMEHRYAGPKSISILGLTTGTIELTSNGWGHKVGLKGEKLKIFSEEGSKTVKWRAVVGNAPALSWLKTRFSTPEGRDPVAIRMNGMGKGMIWVNGQSLGRHWMNFLSPLGKPTQSEYHIPRSYLNPKDNLLVVLEEESANPSQVEILTVDRDVICSFITENHPPNVDSFASKDMKFHSIMESVRPEATLKCSNFKKIVAVEFASYGNPSGFCGNFILGNCNVAAAKSVVEEQCIGKYSCKVALESFSKNGNVCPGLEKTLAIQVRCSH* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1383 837 Gene3D - 366 577 - -
Lan3g1383 837 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 30 833 - -
Lan3g1383 837 SUPERFAMILY (Trans)glycosidases 41 358 IPR017853 -
Lan3g1383 837 Pfam Galactose binding lectin domain 758 835 IPR000922 GO:0030246
Lan3g1383 837 SUPERFAMILY Galactose-binding domain-like 596 741 IPR008979 -
Lan3g1383 837 PANTHER BETA-GALACTOSIDASE RELATED 30 833 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 Gene3D - 600 727 - -
Lan3g1383 837 Pfam Glycosyl hydrolases family 35 48 353 IPR031330 -
Lan3g1383 837 Gene3D - 746 837 IPR043159 -
Lan3g1383 837 Gene3D Glycosidases 39 358 - -
Lan3g1383 837 SUPERFAMILY Galactose-binding domain-like 418 577 IPR008979 -
Lan3g1383 837 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 187 199 IPR019801 GO:0004553|GO:0005975
Lan3g1383 837 ProSiteProfiles SUEL-type lectin domain profile. 750 836 IPR000922 GO:0030246
Lan3g1383 837 Pfam Beta-sandwich domain in beta galactosidase 362 434 IPR041392 -
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 52 69 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 73 91 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 128 147 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 185 200 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 266 281 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 303 318 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 322 338 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 630 644 IPR001944 GO:0004553|GO:0005975
Lan3g1383 837 PRINTS Glycosyl hydrolase family 35 signature 657 673 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1383 Lan-Chr3 25535834 25539483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1383 42 835 Glycoside Hydrolase AT2G16730 59.551 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1383 - - gmx:100791456 1240.33