Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1379 ATGTTTTCAAGGAAAGTAACATCACGGGCATTTGTTTATCATAAAATACTTCCTTTCACTCTATATCATTATTACTCATTACTCATTACTAATTACTACAAAAGTGACCAGCTCCATTTTCAAACTCCAGGGATGAATAACATTCCTTTCTCTACCCTTTTACTTTTCTTCCTTCTAACAGGGCCTTCTTTCGTTTCTCCTTTATATGATGGACCCTTATATGACTCCACTGCTTACACTAAGTGCAAAATGCAGCCCGAGGAGCCACTCTATGGAGGCGGAATTTTCAAGAATGAGTCTCATTTTGTGGGTGGTAGCATTACCAATAACATTGCCACCAACTATGTCAATGGTTATATTGTGCCTTCACTTATTCTGCATAATCTCACTCAGGGGACTATGTACTCCTTTTCCATATGGGTTAGAATTGGAGGTTCAAGTTTTGCCATGATAAGGGCTAGCCTAGAAACAGATAAGGAGGCATATGAGTGCATCGGAACAGTTTTGGCTAAGAGTGGATGCTGGTCATTTCTCAAGGGTGGATTTGTCCTAGACTGGCCTTCAAATTTGTCTACAATCTTATTTCAGAATGCTGATGGTAAAGATATCAATATAGATGTAGCTAGCCAATCACTGCAACCATTTACCAAGCAGGAATGGAGAGTCAATCAACATTATATAATCAATACTCGAAGAAAGCGTGCCGTGACTGTTCATGTGTCAGATAGTAATGGAAATATATTTCAAGGTGCTGCTATCAACATAGAGCAAATCTCAAAAGATTTTCCTATTGGATCTGCAATAGCGAAGACCATTCTTGGCAACCTGCCTTATCAGAATTGGTTTGTGAAGCGGTTCAATGCTGCTGTCTTTGAAAATGAGCTCAAATGGTATGCCACCGAGTTTGAACAAGGCAAGGTCAATTATACCATTCCAGACCAGATGATGCAATTTGTTAGAGCAAACAAAATCATAGCTAGAGGGCACAATATATTCTGGGAAGACCCCAAATACACACCGGCGTGGATTCATAACCTAACTAGCATCCAGTTACAATCGGCTGTTAACTCACGAATAAAAAGTCTCATGAGACAGTACAAAGAAGAATTCATTCACTGGGATGTCAGCAATGAAAGGCTTCATTTTGATTTCTATGAGCAAAGGCTTGGACCTAATGCCTCATTGCATTTCTTTGAGACAGCACATAAGTCAGATCCATTGGCAACCTTGTTTATGAATGACTTCAATGTTGTGGAAACATGCAGTGACGCAAATTCCACGGTTGATGCCTATATCTCACGGATAAGAGACATGCAAAAGAGTGATGTGTTTATGGGAGGAATTGGCTTAGAGGGTCACTTCACAAAACCAAATCCTCCACTTATTAGAGCTATCTTAGACAAGTTAGCAACACTTGGCCTTCCCATTTGGCTTACTGAGATTGATATAAGCAAGACACTTGATAAAGACACGCAGGCAATTTATTTGGAAGAAGTGTTGAGGGAAGGCTTCTCACATCCTTCTGTGAATGGAATAATGCTTTGGACCGCATTACATTCAAAGGGGTGTTACCAAATGTGCCTCACAGACAATGATTTCAAGAACCTCCCTGCAGGTGATGTGGTGGACAAGCTTCTTGAAGAGTGGCAAACTGGTCTTGTAGAGGGAACAACAGATAGTCATGGTTCCTATAGCTTTTATGGGTTCTTAGGAGAATATAGAATTAATGTCAAGTATGGCAAGAGAACTGTAAATTCAACCTTCTCACTATGTAAAGGTGAAGAAACTAGACATTTTACTATTACAGTGTGA 1812 0.3985 MFSRKVTSRAFVYHKILPFTLYHYYSLLITNYYKSDQLHFQTPGMNNIPFSTLLLFFLLTGPSFVSPLYDGPLYDSTAYTKCKMQPEEPLYGGGIFKNESHFVGGSITNNIATNYVNGYIVPSLILHNLTQGTMYSFSIWVRIGGSSFAMIRASLETDKEAYECIGTVLAKSGCWSFLKGGFVLDWPSNLSTILFQNADGKDINIDVASQSLQPFTKQEWRVNQHYIINTRRKRAVTVHVSDSNGNIFQGAAINIEQISKDFPIGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEFEQGKVNYTIPDQMMQFVRANKIIARGHNIFWEDPKYTPAWIHNLTSIQLQSAVNSRIKSLMRQYKEEFIHWDVSNERLHFDFYEQRLGPNASLHFFETAHKSDPLATLFMNDFNVVETCSDANSTVDAYISRIRDMQKSDVFMGGIGLEGHFTKPNPPLIRAILDKLATLGLPIWLTEIDISKTLDKDTQAIYLEEVLREGFSHPSVNGIMLWTALHSKGCYQMCLTDNDFKNLPAGDVVDKLLEEWQTGLVEGTTDSHGSYSFYGFLGEYRINVKYGKRTVNSTFSLCKGEETRHFTITV* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1379 603 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 53 602 - -
Lan3g1379 603 Gene3D Glycosidases 251 557 - -
Lan3g1379 603 SUPERFAMILY (Trans)glycosidases 248 551 IPR017853 -
Lan3g1379 603 SMART glyco_10 295 546 IPR001000 GO:0004553|GO:0005975
Lan3g1379 603 Pfam Glycosyl hydrolase family 10 257 517 IPR001000 GO:0004553|GO:0005975
Lan3g1379 603 PANTHER GLYCOSYL HYDROLASE 53 602 IPR044846 GO:0004553|GO:0005975
Lan3g1379 603 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 249 545 IPR001000 GO:0004553|GO:0005975
Lan3g1379 603 SUPERFAMILY Galactose-binding domain-like 124 203 IPR008979 -
Lan3g1379 603 Gene3D - 105 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1379 Lan-Chr3 25521694 25525023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1379 70 603 Glycoside Hydrolase AT4G38650 65.000 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1379 - - gmx:100806005 914.45