Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1165 ATGGCAACTTTATTCAATTGGGGTGTGAAAGAGAGTCATAGAGGAACCCCAGTGGTGGTTAAGATGGAGAATCCTAATTGGTCAATGGTTGAACTTGAGGGTCCTTCAGAGGAAGATTTTCTCATCACAAACCCTTCTTCTGTTGCTGCAAGAGACAAACGAAGAGGCAAAAACGCTAAACAACTCACATGGGTTCTTCTCCTCAAAGCTCAAAGAGCAGCTGGTTGTTTAACCTCCATTGCCCCTGCATTGTTCACACTTGTCTCCGCCGTGAAACGCCGTGTAGCCGCCGGAAGAACTGATGCTGATGTTGATAACGATGGTGTTGGTAGGGAGAAGGAGAACCCTACTGTGAAGAGCAGGTTCTATTCATGTATCAAAGTGTTTCTATTTTTGTCTGTGCTTCTTTTATGTTTTGAGGTTGCTGCATATTTTAAAGGTTGGCATTTTGGTGCATCTAATCTTCAGTTGGGTTATTTGTATTGGGCACCTGCTTTTGGAGTTAAGGATTTTTTTGAATGGGTTTATGCGCGATGGGTTTTGATTCGGGTTGAATACCTTGCCCCTCCTCTGCAGTTTCTTGCTAGTGCTTGTATTGTGCTGTTCATTATTCAGAGTTTGGATAGGTTGGTGCTTTGTTTAGGATGTTTTTGGATTAGATTTAAGAAAATCAAGCCTGTTCTAAAAGAGGGTGCTTTAGATCTTGAGACTGGGGAGAAGGGTTTCTTTCCTATGGTGCTAGTGCAGATTCCTATGTGTAATGAGAAAGAGGTCTATCAGCAATCAATTGCTGCCGTTTGTAATTTGGATTGGCCAAAGTCCAAGTTTCTAATTCAAGTTCTGGATGATTCGGATGACCCAATTACGGTATCGCTGATCAAGGAGGAGGTTCAAAAATGGCAACAAGAGGGTGCCAACATTTTGTACCGGCATCGGGTAATTAGAGACGGGTACAAGGCTGGTAATCTGAAATCTGCCATGAATTGTAGCTATGTGAAAGACTACGAATTTGTCGCAATCTTCGATGCCGATTTTCAGCCTACTCCAGATTTCCTTAAAAAAACTGTTCCACATTTTAAGGATAATGATGAATTAGGGCTTGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTTCTAACAAGGTTGCAGAACATTAATTTATCATTCCATTTTGAGGTGGAACAACAAGTCAATAGTGTTTTCATTAATTTCTTCGGGTTCAACGGAACGGCTGGAGTGTGGAGAATAAAGGCTTTGGAGGAAGCTGGGGGTTGGTTGGAGAGGACCACTGTCGAGGACATGGATATTGCTGTTAGAGCTCATCTTCATGGCTGGAAATTTATTTTCCTCAATGACGTTGAGTGCCAATGTGAGCTACCAGAATCTTATGAAGCTTATAGGAAACAGCAGCATAGATGGCATTCCGGGCCAATGCAATTGTTTCGACTTTGTTTGCCTGACATCATAAAGGCCAAGATAAGCGTATGGAAGAAATTCAATATGATATTTCTCTTCTTTCTTCTGAGAAAACTGATATTACCATTCTATTCATTTACCTTGTTCTGCATAATTCTCCCCATGACAATGTTTGTACCCGAAGCCGAGCTTCCTGCGTGGGTTGTTTGTTATATCCCTGCTACGATGTCATTTCTTAACATTCTTCCAGCTCCAAAAGCTTTCCCCTTTATTGTCCCTTATCTCCTATTCGAGAACACAATGTCCGTTACCAAATTCAATGCCATGATCTCCGGCCTATTCCAGCTCGGTAGTGCATACGAGTGGGTCGTCACTAAGAAATCAGGTCGATCCTCTGAGGGTGATCTAGTTTCAATGATTGAGAAACCAAAGTATCAAAGAGGGTCATCCGAGCCTGATCTCGACGAAATGAAAGAGGAAATCCTAAGGCAGCAAGAGGAAAAGGCTAAGAAAAAGAACAAGAAGAAAAAGAAGCATAATAGAATATACATGAAGGAACTTGCTTTGGCATTTCTACTTCTAACAGCCTCAGCAAGGAGTCTCCTTTCTGCTCAGGGAATTCATTTCTACTTCTTGTTATTCCAAGGAATTTCGTTTCTCTTAGTTGGTCTAGACTTGATTGGTGAACAAGTTGACTAA 2124 0.4171 MATLFNWGVKESHRGTPVVVKMENPNWSMVELEGPSEEDFLITNPSSVAARDKRRGKNAKQLTWVLLLKAQRAAGCLTSIAPALFTLVSAVKRRVAAGRTDADVDNDGVGREKENPTVKSRFYSCIKVFLFLSVLLLCFEVAAYFKGWHFGASNLQLGYLYWAPAFGVKDFFEWVYARWVLIRVEYLAPPLQFLASACIVLFIIQSLDRLVLCLGCFWIRFKKIKPVLKEGALDLETGEKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKFLIQVLDDSDDPITVSLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNSVFINFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKAKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSMIEKPKYQRGSSEPDLDEMKEEILRQQEEKAKKKNKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1165 707 Coils Coil 629 657 - -
Lan3g1165 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Lan3g1165 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 522 IPR029044 -
Lan3g1165 707 PANTHER - 5 706 - -
Lan3g1165 707 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 5 706 - -
Lan3g1165 707 Pfam Glycosyl transferase family group 2 338 543 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1165 Lan-Chr3 23904361 23907900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1165 1 707 Miscellaneous Gene Families AT4G07960 78.333 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1165 - - gmx:100805969 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1121 15 20018059 20021748 Lan3g1165 3 23904361 23907900 LSH