Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1161 ATGATGATTCAAAGATTTTCAAGTTTAAGGAAATTGCTTCATCAGGCTTGTTGTGTTTCTTCTTCTTCTTCTAAGCAGATTGGAGCTTACAATGGATATGCATCTCATCCCTCTTCCTCTCTTCCACTCCCCCTCCCCCTCCCCCTCCCATCTTACAGTGGGGAAGAATATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTAATGCCAACTGATTTTATGTACATTAATAAATGTTCATCTGCCCAGAATTTTGGACAAGGACAGCTCAGTCCTTATGGTCACATTCAGCTTAGCCCATCAGCTGGAGTTCTCAATTATGGCCAGGGATTATTTGAAGGCACAAAAGCATACAGAAAAGAAAATGGGAAGCTTTTGCTGTTCCGTCCAGAACAAAATGCAATTCGAATGCAGAATGGAGCAGAGAGAATGTGCATGATATCCCCTTCTATTGATCACTTTGTTGATGCTTTGAAACAAACTGTCTTGGCAAATAAGCGTTGGGTTCCTCCTCCGGGCAAAGGATCATTGTACCTAAGACCTCTGCTCTTAGGAACTGGTCCAGTGTTGGGTTTGGCTCCTTCACCTGAATACACTTTCCTCATATATGCTTCCCCTGTTCGCAACTATTTCAAAGAGGGTTCGGCACCCCTCAACTTGTTCGTGGAGGAGGATTATGATCGCGCTTCTCGCCGTGGTACTGGAAGTGTTAAAACCATTTCTAATTATGCACCGGTCTTGATGGCACAAATTAGAGCCAAGAGTAGAGGGTTTTCAGATGTGTTATACCTTGATTCAGCCACCAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGACAAATACATCTTAACACCTGCTACCAATGGAACCATTCTGGCTGGAATTACCAGAAAAAGTGTCATTGAAATTGCTCGTGATCACGGCTATCAGGTAGAAGAGCGTGCAGTAACAGTGGATGAGTTGATTGAGGCTGATGAAGTTTTCTGCACAGGTACTGCTGTTGGTGTTGCTCCTGTAGGGAGTGTCACATACCAGGATAAAAGGGTGGAATACATTACAGGCTCTGGAACCATTTGTCAAGAGCTGAACTCAACCCTTTTAGGAATTCAAACGGGTATTATTGAAGATAAGAATGGATGGGTCATTGAAATTAACTGA 1179 0.4317 MMIQRFSSLRKLLHQACCVSSSSSKQIGAYNGYASHPSSSLPLPLPLPLPSYSGEEYADVDWDSLGFGLMPTDFMYINKCSSAQNFGQGQLSPYGHIQLSPSAGVLNYGQGLFEGTKAYRKENGKLLLFRPEQNAIRMQNGAERMCMISPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPSPEYTFLIYASPVRNYFKEGSAPLNLFVEEDYDRASRRGTGSVKTISNYAPVLMAQIRAKSRGFSDVLYLDSATKKNLEEVSSCNIFIAKDKYILTPATNGTILAGITRKSVIEIARDHGYQVEERAVTVDELIEADEVFCTGTAVGVAPVGSVTYQDKRVEYITGSGTICQELNSTLLGIQTGIIEDKNGWVIEIN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1161 392 Gene3D - 220 391 IPR043132 -
Lan3g1161 392 PIRSF BCAT1 50 392 IPR005786 GO:0004084|GO:0009081
Lan3g1161 392 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 52 388 IPR036038 GO:0003824
Lan3g1161 392 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 16 392 - -
Lan3g1161 392 ProSitePatterns Aminotransferases class-IV signature. 275 304 IPR018300 GO:0003824
Lan3g1161 392 Gene3D - 49 219 IPR043131 -
Lan3g1161 392 Pfam Amino-transferase class IV 111 349 IPR001544 GO:0003824
Lan3g1161 392 CDD BCAT_beta_family 98 379 IPR033939 GO:0004084|GO:0009081
Lan3g1161 392 PANTHER AMINO ACID AMINOTRANSFERASE 16 392 IPR005786 GO:0004084|GO:0009081
Lan3g1161 392 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 88 391 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1161 Lan-Chr3 23868998 23873345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1161 K00826 - gmx:100782644 630.557