Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1150 ATGGCTGTGCTTCCTGATACAGAACCAACATCAAAAAAGTACATTTCATTGGAAGAACTGAAGAAACACAACAAAAGAGATGATCTTTGGATCTCAATCCATGGAAAGATCTACAATGTTACCAATTGGGCTAAACATCACCCTGGTGGTGATCTTCCATTGTTGAACCTCGCTGGTCAAGATGTTACTGATGCTTTTCTAGCCTATCATCCCATTAATGCATCAAAATACCTTCAAAACTTCTTCAATGGGTATTATCTCAGTGATTACGCTGTCTCTGAGGTTTCCAAAGACTATAGAAAACTCTTGTCCCATTTTTCATCCATTGGGTTGTTTGAGAAAAAAGGACATGGTGTTTTCTTCACATTGTGGTTCATGGTAATTCTGTTTTGTGCTAGTGTTTATGGTGTTTTCTTTAATGACAACCCTTTTGTGCATTTGGGTTGTGGTGGGTTGATGGGGTTGTTTTGGATTCAGAGTGGTTGGATTGGACATGATTCTGGTCATTATCAGATTATGGCAACAAAGGGTTTCACTCGTTTTGCTCAGGTTCTATCTGGGAATTGTCTTGCAGGGATTAGTATTGCATGGTGGAAGTGGAATCACAATGCTCATCACATTGCTTGTAATAGTCTTGATTTTGATCCAGATCTTCAGCATATGCCATTTTTTGTGGTATCTAATAAGTTCTTCAATTCCATTACTTCTTACTTCTATGACAGGAAGATGAATTTTGATGGTTTTACTAGGTTCCTTGTTAGTTACCAGCATTGGACTTTTTATCCGGTTATGTGTTTCGCTAGACTCAATTTATTTGCACAATCGTTCATCTTGCTGTTTTCCAAGCGAAATGTACCGAATAGGGTCCAGGAACTTTTAGGGCTGCTTGTTTTTTGGATTTGGTACCCTCTTTTGGTGTCATACTTGCCCAATTGGAGTGAAAGAATATTGTTTGTGATTGCTAGTTTTTCGGTCACTGGGATCCAACATGTTCAGTTCTGCTTGAATCATTTCTCTTCAAGCGTCTATCTTGGTCACCCGAGTTCTAGTGAGTGGGTTGAGAAGCAGACTAATGGGACTCTTGATGTGAAGTGCTCACCTTGGATGGATTGGTTTCATGGCGGGTTGCAATTTCAGGTCGAACATCATCTGTTTCCTCGGATGCCAAGGAATCATCTTCGGACAGTTTCACCTTTCGTTAAGGAGCTGTGCAAGAAACATAATGTGCCTTACCATTGTGTCTCATTCTGGAATGCCAATGTGCTAACAATTCAGACTCTCCGAAATGCGGCCTTGCTGGCTCGTAATCTGTCCAATCCCATTCCGAAAAACTTAGTTTGGGAAGCTGTTAATACTCATGGATGA 1365 0.4037 MAVLPDTEPTSKKYISLEELKKHNKRDDLWISIHGKIYNVTNWAKHHPGGDLPLLNLAGQDVTDAFLAYHPINASKYLQNFFNGYYLSDYAVSEVSKDYRKLLSHFSSIGLFEKKGHGVFFTLWFMVILFCASVYGVFFNDNPFVHLGCGGLMGLFWIQSGWIGHDSGHYQIMATKGFTRFAQVLSGNCLAGISIAWWKWNHNAHHIACNSLDFDPDLQHMPFFVVSNKFFNSITSYFYDRKMNFDGFTRFLVSYQHWTFYPVMCFARLNLFAQSFILLFSKRNVPNRVQELLGLLVFWIWYPLLVSYLPNWSERILFVIASFSVTGIQHVQFCLNHFSSSVYLGHPSSSEWVEKQTNGTLDVKCSPWMDWFHGGLQFQVEHHLFPRMPRNHLRTVSPFVKELCKKHNVPYHCVSFWNANVLTIQTLRNAALLARNLSNPIPKNLVWEAVNTHG* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1150 454 CDD Delta6-FADS-like 147 409 - -
Lan3g1150 454 PIRSF FA_sphingolip_des 2 440 IPR012171 GO:0016491
Lan3g1150 454 Pfam Fatty acid desaturase 151 413 IPR005804 GO:0006629
Lan3g1150 454 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 12 96 IPR001199 -
Lan3g1150 454 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 10 453 - -
Lan3g1150 454 Pfam Cytochrome b5-like Heme/Steroid binding domain 16 86 IPR001199 -
Lan3g1150 454 Gene3D - 5 85 IPR036400 -
Lan3g1150 454 PANTHER FATTY ACID DESATURASE 2 10 453 IPR012171 GO:0016491
Lan3g1150 454 SMART Cyt_b5_2 15 87 IPR001199 -
Lan3g1150 454 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 10 89 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1150 Lan-Chr3 23789325 23791204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1150 7 454 Lipid Metabolism Gene Families AT2G46210 62.946 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1150 K21737 - jre:109021249 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1150 3 23789325 23791204 Lan3g1150 3 23789325 23791204 ECH