Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1133 ATGGCTTCTACTTCTGTTTCAATGGCTTTGCCACTAACCACTGTTACTCAAAACAAGGTGATTCAACCATCTTCTGGATCCTTTTTCAAGCCACTACCCATAAGACAACAAAAAAGGACCCTCATTTCAGAACCACTATCAAAAACCAAGGGTGGAATTCAAGCATCTTTGAAGGAAAAAGCAGTGACAGTTCTTACAGTTGCTTCATTAACAGCATCAATGGTGATACCTGAAGTTGCTCATGCTGCTGGCTCTGATGTTTCTCCATCACTTCAGAACTTCTTGCTTAGTATTTTTGCTGGTGGGGTTGTGCTAGGTGGCTTATTTGGAGCTGTTATTGGTGTTTCCAACTTTGATCCTGTTAAGAGAACCTAG 375 0.4133 MASTSVSMALPLTTVTQNKVIQPSSGSFFKPLPIRQQKRTLISEPLSKTKGGIQASLKEKAVTVLTVASLTASMVIPEVAHAAGSDVSPSLQNFLLSIFAGGVVLGGLFGAVIGVSNFDPVKRT* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1133 124 Gene3D Single helix bin 86 124 - -
Lan3g1133 124 Pfam Photosystem II reaction centre X protein (PsbX) 87 123 IPR009518 GO:0009523|GO:0015979|GO:0016020
Lan3g1133 124 PANTHER OS07G0673550 PROTEIN 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1133 Lan-Chr3 23671157 23671787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1133 - - gmx:100305487 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1133 3 23671157 23671787 Lan3g1133 3 23671157 23671787 ECH
Lan15g1093 15 19870533 19871096 Lan3g1133 3 23671157 23671787 LSH