Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1132 ATGAACGACAAAGGTGTTTCGAGAAACGATGATTTGATGTCATTTGAAAATAAGATGATACGAGCGGGTCTGTTAGCGTCTTGCTCCAACCGCCGCCGCTTCGACGGAGAGAGTAGCTCCGCTTCCGCTGTTGCCGCCGCCGCTGATGATGATAATCTTGATTCTCATCACAAGCGTGCTAAAGTTTACTATGATTTCGATGGCTTTCATGGTGATTATAATCATATTCGAAGCTTGCCTTTTCAACCTACCAATAATATCTATACTTGTCATGATGATTTTGGGGTGATGTTTACTGGTGAGGAGAATAACTTTGATTCTAGCCATGTGAAAGACAATGAAGGGGATAACTGTGACATGTCAGAAGTAGAACATGCAACCATCATAATGGATCTTTCGGATGACTTATTGCATATGATTTTCTCATTTTTGGATCATACCAATCTGTGCAAAGCTGCCTCAGTCTGTAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTCTGGAAGAGTTTGAACTTTGTTAATCGGAACATATCTGTAGAGCAATTTGAGGACATATGTAGGCGTTATCCTAATGCCTTGGCAGTGAGCATATCTGGTCCTGAAATTCACCTTCTTGCGATGAAGGCTATCTCTTTGTTAAGAAATCTTGAGGTTTTAAAATTGGGAAGAGGACATATAGATGATAGTTTTTTCCATGCTTTGGCTGATTGTTCTATGTTGAAAAAACTGAGAATCAGTGATGCTACACTTGGTGGTGGTGTTCTGGAGATACCTATTGATCATGACAGTTTACGTCATCTTAAATTAAAAAAATGCCGTGTGATGCGCATAACAGTCAGGTGCCCACAACTTGAAACCATGTCATTAAAGCGTAGTAACATGGTACAAGCTGTTCTTAATTGCCCTCTTTTGCGCAAACTTGACATAGGCTCTTGCCACAAACTTCCTGATTCTGCAATTCGCTTAGCTGCAACTTCATGCCCGCAATTAGTGTCGTTGAATATATCTAATTGTTCATGTGTTAGTGATGAAACACTACGTGAAATATCCCAGACTTGTGCTAGTCTCAGTTTCCTTGATGCATCCTACTGCCCAAACATATCCTTGGAGTCTGTTAGACTGCCCTTGTTGACAGTTCTTAAGCTTCACAGTTGTGAGGGCATCACTTCAGCTTCAATGGCTGCAATATCTCACAGCTCCCTGTTGGAGGTTTTGGATCTTTATAATTGTAGTCTATTGACTTCAGTGTCTCTGGATCTTCCACATTTGCAGAATATTAGATTGGTACACTGCCGCAAATTTACTGATTTGAACTTGAGGGCTATAATGCTCTCTTCTATGCTGGTGTCCAACTGCCCTGCACTTCAGCGCATCAACATCACTTCAAATTCACTTCAAAAATTAACAATGCCAAAGCAGGGCAGCTTAAACACAGTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGACAAACTCTGTATGTGATGTTTTTAGTGATGGTGGAGGATGCCCGATGTTGAAATTATTAGTTCTTGATAGTTGTGAGAGTTTAACATCAGTTCGATTCACCAGTACCTCTTTAGTCAGTCTCTCTCTTGGCGGTTGCCCAATAACAAATATTGAGCTCAAATGTCCTAATCTTGAGAAAGTTATTTTGGATGGGTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTCAACTTAGGAATATGCCCAAAGTTGAACATGCTCAGCATTGAAGCACCATTCATGGTTTCACTTGAGTTGAAAGGATGTGGCTTACTGTCCAAAGCATTTATTAATTGTCCACTCCTAACATCTTTGGATGCTTCCTTTTGCAGCCAACTAACAGATGAGGACTTGTCCGCAACAACTGCATCATGCCCACTAATTGAATCATTAATATTGATGTCTTGTGCATCAATTGGTTCAGAAACTTCAGATGGACTCCGTTCTCTGCATTGGCTTCCTAATTTAACTGTTCTTGACTTATCATACACTTTCTTGGTAAACTTGCAGCCTGTTTTTGAATCTTGTTCCCAGCTAAAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACTGACACCTCACTCGAACCTCTTTACAAAGGTGCTTTACCAGCACTTGAGGAGTTGGACTTGTCTTATGGAACTCTCTGTCAGTCTGCCATAGAAGAGCTTCTTGCTTCCTGCACAAACCTCACACATGTAAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGGTGCAGACGCGGTTGTGTGCAGATGAATGAGTTGGGTGCTGTTAACACCCCATTTGGTGCAAGTTCCCATGAGAAGATACCTGAAGCAAGTGAGCAGTCCACCCGCTTATTGCAGAATCTTAACTGTGTGGGATGTCCTAATATTAGGAAGGTTGTCATTCCAGATTGCTTCCATTTATTATTTTTAAATCTTTCACTCTCAGCAAATTTGAAGGAGGTTGATGTTACTTGTCTCAACCTGTGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGTTATTGTGTCCGAGATTGTCCAGTCTATTCCTTCAGTCTTGCAATATTGACGAGGAAGGTCTTGAAGCTGCTATATCAAATTGCTCTATGCTGGAGACTCTTGATATTCGCTTCTGTCCAAAGATACGCTCAATGAGTATGGGGAGGTTACGTGCAGCATGTCCTAGTTTGAAGCGTATATACAGCAGTTTGTCAAGTTGA 2784 0.4106 MNDKGVSRNDDLMSFENKMIRAGLLASCSNRRRFDGESSSASAVAAAADDDNLDSHHKRAKVYYDFDGFHGDYNHIRSLPFQPTNNIYTCHDDFGVMFTGEENNFDSSHVKDNEGDNCDMSEVEHATIIMDLSDDLLHMIFSFLDHTNLCKAASVCKQWRTASAHEDFWKSLNFVNRNISVEQFEDICRRYPNALAVSISGPEIHLLAMKAISLLRNLEVLKLGRGHIDDSFFHALADCSMLKKLRISDATLGGGVLEIPIDHDSLRHLKLKKCRVMRITVRCPQLETMSLKRSNMVQAVLNCPLLRKLDIGSCHKLPDSAIRLAATSCPQLVSLNISNCSCVSDETLREISQTCASLSFLDASYCPNISLESVRLPLLTVLKLHSCEGITSASMAAISHSSLLEVLDLYNCSLLTSVSLDLPHLQNIRLVHCRKFTDLNLRAIMLSSMLVSNCPALQRINITSNSLQKLTMPKQGSLNTVALQCQSLQEVDLSECESLTNSVCDVFSDGGGCPMLKLLVLDSCESLTSVRFTSTSLVSLSLGGCPITNIELKCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNMLSIEAPFMVSLELKGCGLLSKAFINCPLLTSLDASFCSQLTDEDLSATTASCPLIESLILMSCASIGSETSDGLRSLHWLPNLTVLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDTSLEPLYKGALPALEELDLSYGTLCQSAIEELLASCTNLTHVSLNGCVNMHDLNWGCRRGCVQMNELGAVNTPFGASSHEKIPEASEQSTRLLQNLNCVGCPNIRKVVIPDCFHLLFLNLSLSANLKEVDVTCLNLCFLNLSNCSSLEILKLLCPRLSSLFLQSCNIDEEGLEAAISNCSMLETLDIRFCPKIRSMSMGRLRAACPSLKRIYSSLSS* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1132 927 Pfam F-box domain 131 170 IPR001810 GO:0005515
Lan3g1132 927 PANTHER OS10G0396666 PROTEIN 49 889 - -
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 686 767 IPR032675 -
Lan3g1132 927 SUPERFAMILY RNI-like 478 711 - -
Lan3g1132 927 SUPERFAMILY RNI-like 212 530 - -
Lan3g1132 927 ProSiteProfiles F-box domain profile. 126 172 IPR001810 GO:0005515
Lan3g1132 927 SMART LRR_CC_2 554 579 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 422 447 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 303 328 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 513 543 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 485 510 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 889 914 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 376 401 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 617 642 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 694 719 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 329 354 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 746 777 IPR006553 -
Lan3g1132 927 SMART LRR_CC_2 864 888 IPR006553 -
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 375 449 IPR032675 -
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 597 685 IPR032675 -
Lan3g1132 927 PANTHER OS10G0396666 PROTEIN 49 889 IPR044703 GO:0010252|GO:1905393
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 123 374 IPR032675 -
Lan3g1132 927 SMART fbox_2 132 172 IPR001810 GO:0005515
Lan3g1132 927 SUPERFAMILY F-box domain 121 184 IPR036047 GO:0005515
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 768 927 IPR032675 -
Lan3g1132 927 Gene3D Ribonuclease Inhibitor 450 574 IPR032675 -
Lan3g1132 927 SUPERFAMILY L domain-like 610 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1132 Lan-Chr3 23658655 23664956 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1132 - - lang:109343805 1806.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1132 3 23658655 23664956 Lan3g1132 3 23658655 23664956 ECH
Lan15g1091 15 19856527 19862929 Lan3g1132 3 23658655 23664956 LSH