Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1124 ATGGGTAGCGACGGCGATAGGTGGTGCGTAGTCACTGGAGGCCGTGGCTTCGCCGCACGTCACTTGGTAGAAATGCTTATCCAGTCCAACATATACTCCGTTCGCATCGCCGATTTAGGATCCACCATAGATCTCGATCCTTCTGAACAATTAGGCATTCTCGGCGAAGCTTTAACCTCTGGCCGTGCTCACTATATAACGCTCGATCTTCGCAACAAGGAGCAAGTGTTAAAAGCGTGTGAAGGAGCTGAAGTTGTTTTCCACATGGCTGCTCCTAATTCTTCCATTAATAACTACCAGCTCCATCACTCTGTTAATGTTCAAGGAACGAAGAATGTGATCGATGCTTGTTTAGAGCTTAAGGTGAAGCGACTTATATACACTAGCTCTCCTAGCGTTGTTTTTGACGGTGTTCATGGAATTCATAATGGAAATGAAACATTGCCGTATCCATCATTGCATAATGACCATTATTCGGCTACTAAAGCCGAGGGCGAGGTGTTGGTTATTAAGGCTAATGGGAAGGGTGGACTGTTAACATGCTGCATACGTCCTAGCAGCATTTTTGGGCCTGGCGATAAACTGCTTGTGCCTTCATTAGTTGATGCTGCCAGGACAGGGAAATCGAAGTTCATTATTGGCGATGGCAATAATGTTTATGATTTTACATATGTTGAAAATGTGGCTCATGCTCATATATGTGCTGAGCGAGCTCTGGCTTCAGAGGGGACAGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATAACGAATACGGAACCTATAAAGTTTTGGGAGTTCATGTCACTGATCCTGGAAGGTCTTGGATATGAAAGGCCTAAAATAAAGATTCCTGCTTTTGTTGTCCTGCCAATTGCACATTTGGTGGAGTTGATATATAAGCTGCTAGGCCCATATGGAATGAAGGTGCCACAGTTGACACCCTCAAGAGTAAGACTCCTGTCTTGCAGTAGATCGTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGTCTTCAGAGGACGATTGAATCATACCCACACCTGAGGGCTGAAAATCAACCTAAAACCAAAAGAGAAGGACCCTCCAAAGCTTCCATATACCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCAAACTTTCACCACATTGTTGGTCTTGGCTGCAATATACTTCAACTTCATTGCATCTGGGAACACCTTCGTTACTGCTATTTCAAAGCTTCTATTATTCATATCGATCTTTTTATTCATTCATGGCATTCTACCTGCAAAGATATTGGGGTATACTATTGAGAAAACGCCCACATCATGGTTTCGTTTATCAGAAGATATGTCCCATCAAATTGCTCTGTCAGTGGCCTCATCTTGGAATTTGTCTGTGGATGTTTTAAAATCCCTTGCACAAGGAAATAACTTGGAGCTGTTCTCCAAGGTTGTTTTCTCTCTAGTCATCCTTAACTTTCTTGGAGGCTTTTCACTTCAAAACCTATATACTATAGGTCTTGCCTTTGCATTTGTAGCCTTCTACATTTATGAAAAGAAGGAAGAAGACATCGATGACATATTCATAAAAATACATTCTTTTGGATACAAGTTGAAATCTGATTTCACCAGGAAGTTTCTTCTTTCAAAGAAGATTGATTGA 1692 0.4226 MGSDGDRWCVVTGGRGFAARHLVEMLIQSNIYSVRIADLGSTIDLDPSEQLGILGEALTSGRAHYITLDLRNKEQVLKACEGAEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACLELKVKRLIYTSSPSVVFDGVHGIHNGNETLPYPSLHNDHYSATKAEGEVLVIKANGKGGLLTCCIRPSSIFGPGDKLLVPSLVDAARTGKSKFIIGDGNNVYDFTYVENVAHAHICAERALASEGTVSEKAAGEAYFITNTEPIKFWEFMSLILEGLGYERPKIKIPAFVVLPIAHLVELIYKLLGPYGMKVPQLTPSRVRLLSCSRSFDCSKAKDRLGYAPIVTLQEGLQRTIESYPHLRAENQPKTKREGPSKASIYLGSGRVADTLLWKDRKQTFTTLLVLAAIYFNFIASGNTFVTAISKLLLFISIFLFIHGILPAKILGYTIEKTPTSWFRLSEDMSHQIALSVASSWNLSVDVLKSLAQGNNLELFSKVVFSLVILNFLGGFSLQNLYTIGLAFAFVAFYIYEKKEEDIDDIFIKIHSFGYKLKSDFTRKFLLSKKID* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1124 563 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 285 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lan3g1124 563 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 5 369 - -
Lan3g1124 563 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 369 - -
Lan3g1124 563 Pfam Reticulon 383 538 IPR003388 -
Lan3g1124 563 ProSiteProfiles Reticulon domain profile. 383 536 IPR003388 -
Lan3g1124 563 Gene3D - 3 359 - -
Lan3g1124 563 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 355 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1124 Lan-Chr3 23581324 23588839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1124 10 372 Lipid Metabolism Gene Families AT2G33630 32.021 8.72e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1124 K23558 - gmx:100816854 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1124 3 23581324 23588839 Lan3g1124 3 23581324 23588839 ECH