Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1117 ATGCTTCCTCCAACTACTGTTCAACAAGAACACACTCGTCTTCTTGATTTCGCTTCTCACATTGGTCGCTTTACATTTGATTCTTCCAATTTTCTCAACTTATTTTCACATTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCTCACTCTTCTTCTATTCTTTTGAATTCATTGACCTTCAAAACTACAAGGGTCAGAAACCCTGCTTCTCTAAGCTTGAATTTTGGAGGGAAAGGGGATTTCAATTTCAGGAGGGTTTTCACTGACTTCAACACTGCTATTCGTTTTCATTGCCACAAATCACCAATTGGGTTTGCTTCATTGGGTACTGATTCTGGGGATGGTAATAACAATAACAATAACAACGATGTTTGTGATGTTATTGATAATGATGGAAATTCACCCAATGGTGTTCAGGGTCAGAAACCCAAGAAAGTTTTGATTTTGATGAGTGATACTGGTGGTGGTCATAGAGCTTCTGCAGAAGCTATTAAAGCTGCTTTTTATGAAGAATATGGAGATCAATATCAGGTGTTTGTTTCTGATTTATGGTCTGAACACACGCCTTGGCCATTTAATCAACTTCCTAAGAGCTATAGTTTTTTGGTGAAACATGGGTCTTTGTGGAAAATGACTTATTATGGAACTGCCCCACGTGTAGTGCATCAGTCTAATTTTGCTGCAACTTCAGCATTCATAGCTCGTGAGGTTGCTAAGGGGCTAATGAAATATCAGCCAGATGTAATAATCAGCGTGCATCCGTTGATGCAACATGTTCCACTTCGTATTTTGAAGACAAGGGGTCTTTTAAAGAAGATTGTTTTTACCACAGTTGTCACAGATTTAAGCACCTGCCATCCTACATGGTTTCATAAGCTTGTAACCAGATGCTATTGTCCGACAACAGAACTTGCAAAAAGGGCACTCAAAGCTGGACTTCAGCAAACACAAATAAAGATTTATGGTCTGCCTGTGCGACCTTCTTTTGTTAAGCCGGTTCAGCCAAAGGATGAACTAAGGAGATTATTAGGCATGGATGAGGATCTTCCTGCCGTATTGTTGATGGGGGGAGGTGAAGGTATGGGCCCGATTGAGGCTACTGCTCGGGCACTTGGAGATATGTTATATGATGAAAGCCTTGGAGCTCCTGTTGGTCAAGTTCTTGTTATTTGTGGTCGTAATAAGAAGCTTGCTGACAAATTGCGTTCAATTACTTGGAAGGTTCCTGTTCAGGTCAAGGGATTTGTCAACAAAATGGAAGAATGCATGGGAGCTTGTGATTGCATCATTACAAAAGCTGGACCAGGGACGATTGCAGAGGCCATGATCCGAGGCCTGCCAATTATATTGAATGGTTATATTGCTGGCCAGGAAGCTGGCAATGTACCCTATGTAGTTGAAAATGGATGTGGCAAGTTCACTAAATCTCCTAAGGAAATAGCGAAATTTGTTTCCGAGTGGTTTGGTCCAAAAGCCGATGAGTTGAAAGCAATGTCACAAAATGCATTGAAGCTAGCTAGGCCAGATGCTGTGTTCAAGATCGTCCGCGACCTTCACGAGCTTGTCAAAGAAAGAAGTTTGCTTCTAGAGTACTCTTGTACAGCTTAA 1620 0.4105 MLPPTTVQQEHTRLLDFASHIGRFTFDSSNFLNLFSHSSSSSSSSSSSSSYSHSSSILLNSLTFKTTRVRNPASLSLNFGGKGDFNFRRVFTDFNTAIRFHCHKSPIGFASLGTDSGDGNNNNNNNDVCDVIDNDGNSPNGVQGQKPKKVLILMSDTGGGHRASAEAIKAAFYEEYGDQYQVFVSDLWSEHTPWPFNQLPKSYSFLVKHGSLWKMTYYGTAPRVVHQSNFAATSAFIAREVAKGLMKYQPDVIISVHPLMQHVPLRILKTRGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTTELAKRALKAGLQQTQIKIYGLPVRPSFVKPVQPKDELRRLLGMDEDLPAVLLMGGGEGMGPIEATARALGDMLYDESLGAPVGQVLVICGRNKKLADKLRSITWKVPVQVKGFVNKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFTKSPKEIAKFVSEWFGPKADELKAMSQNALKLARPDAVFKIVRDLHELVKERSLLLEYSCTA* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1117 539 CDD GT28_Beta-DGS-like 150 526 - -
Lan3g1117 539 Gene3D Glycogen Phosphorylase B; 338 510 - -
Lan3g1117 539 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 74 530 - -
Lan3g1117 539 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 148 526 - -
Lan3g1117 539 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 161 329 IPR009695 GO:0009247|GO:0016758
Lan3g1117 539 Pfam Glycosyltransferase family 28 C-terminal domain 389 473 IPR007235 GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1117 Lan-Chr3 23511275 23516333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1117 1 539 Glycosyltransferase AT4G31780 64.860 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1117 K03715 - gmx:100804814 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1117 3 23511275 23516333 Lan3g1117 3 23511275 23516333 ECH