Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1116 ATGCAGGAGAAGGAGGAAAATCAAAATCTGGAGGATCCTTATGGTGAAGTTGTGGAAGAATATGATGAATCCAGAAAAGGGGTTTGTGGTTGCCTTTGTATTCCAGTGCATTGGTTCAGAATGCTTTCAAGGGAAATGCATTGGAGCTTTGTGTTTGGGGTAATAGTTATTTATGGAGTAAGTCAAGGACTTGGTGGAGCACTTTCTAGTGTTGGCACCAAGTATTATATGAAAGATGTTCAGAAGGTGCAGCCATCAGAGGCACAGGTTTATGCTGGAATTACATATATTCCTTGGATTGTTAAGCCTTTGTGGGGACTTCTCACTGATGTTCTCCCGATTTTCGGATATCGCAGGCGACCTTATTTCATTTTGGCTGGTTTAATAGGAGTGATTGGCATGCTTTTGTTATCTCTGCACAAAAACCTGCATCTTGTTTTGGCCCTTCTGTCGTTAACAGCTGGAAGTGCTGGGGTAGCAATAGCAGACGTGACCATCGATGCTTGTGTGGCACAGAACAGTATCTCTCATCCTTCACTCGCTGCTGACATGCAAAGTTTATGCGCCTTAAGTAGTTCTGTTGGAGCATTATTAGGATTCTCCATTAGCGGTATCTTTGTTCACCTTATGGGCCCTATGGGGGTGTTTGGTTTGATAACAATCCCAGCAGGACTTGTAATATTGGTTGGTTTTGTACTTCAAGAGCCTCACATGCCTAATTTTGCTTACAATCAGGTGAACCAAAAGTTTATTGATGCTAGCTTGGCTATGTGGAGAACATTGAAGAGTGAAGAAGTGTGGAGGCCTTGTTTATACATGTATTTATCCCTTGCTTTGAGTTTGAATATCCTTGAAGGAATGTTCTATTGGTATACAGACAAAGAAGCTGGGCCAGCTTTCTCTGAGAAAACAATTGGTTTTATGTTTTCAGTCGGTTCAGTGGGCTCGCTTTTAGGAGCAATACTATACCAGTATGCTTTAAAGGATTACGCATTCCGAGACTTGCTCTTCTGGACTCAGTTATTCTTTGGTTTGTCAGGCATGCTCGATCTGATTATCGTCTTGAGATTAAACCTGATGTTTGGTATGCCAGATTATGTCTTCATTGTGATAGTCGAAAGTGTAGCTCAAATGACTAATCGACTCAAGTGGATGCCTATGCTTGTACTCAGCTCAAAGCTTTGTCCTTCGGGTATTGAGGGCACTTTCTTTGCACTACTAATGTCAATTGATAATGCTGGAGTTCTTTCAGCTTCATGGGCAGGAGGCATTTTACTCCACGTGCTAAAGATCACGCGGACGAAGTTCGATAATCTATGGATAGCAATTTTGATCCGGAACATTTTAAGAATCACTCCACTTTGTCTGCTGTTTTTGGTACCTAAAGCTGATCCAAACTCTTCCATTCTCCCTAGTGAATGCATGGCTTCGAACATGGTTGTCGAGGTTGACAATTCGGAGACGGAGAATATTGAGTTGGTCTCCCTTGTAAACAATGTTGATGGTAAATGA 1512 0.4193 MQEKEENQNLEDPYGEVVEEYDESRKGVCGCLCIPVHWFRMLSREMHWSFVFGVIVIYGVSQGLGGALSSVGTKYYMKDVQKVQPSEAQVYAGITYIPWIVKPLWGLLTDVLPIFGYRRRPYFILAGLIGVIGMLLLSLHKNLHLVLALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCALSSSVGALLGFSISGIFVHLMGPMGVFGLITIPAGLVILVGFVLQEPHMPNFAYNQVNQKFIDASLAMWRTLKSEEVWRPCLYMYLSLALSLNILEGMFYWYTDKEAGPAFSEKTIGFMFSVGSVGSLLGAILYQYALKDYAFRDLLFWTQLFFGLSGMLDLIIVLRLNLMFGMPDYVFIVIVESVAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNAGVLSASWAGGILLHVLKITRTKFDNLWIAILIRNILRITPLCLLFLVPKADPNSSILPSECMASNMVVEVDNSETENIELVSLVNNVDGK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1116 503 SUPERFAMILY MFS general substrate transporter 48 459 IPR036259 -
Lan3g1116 503 CDD MFS_FBT 53 458 - -
Lan3g1116 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 14 502 IPR039309 -
Lan3g1116 503 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 14 502 - -
Lan3g1116 503 Pfam BT1 family 62 229 IPR039309 -
Lan3g1116 503 Pfam BT1 family 277 463 IPR039309 -
Lan3g1116 503 Gene3D MFS general substrate transporter like domains 35 447 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1116 Lan-Chr3 23503282 23507381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1116 - - ccaj:109816000 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1116 3 23503282 23507381 Lan3g1116 3 23503282 23507381 ECH
Lan10g0929 10 13936974 13939838 Lan3g1116 3 23503282 23507381 LSH