Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1112 ATGAGACATAGTACTACTCTCATCATTAGTGTTCTCTACTTTGTGTTTGTCATATTCAACAACGTTTGTGAATGTCACAAAACAACAACATCATCATCATCATCAAATCCTAAGTGTAAAGCATGGCTTGTTCAATCCATTCCCACAGATATGCCTCACCTCTCCCATGTTCCTGGTGTCCTCTCCACTGGGGATGTGCTTCGGTGGCTGGCTGAAAATTCTACCAAAAAGCTGGATGTAATTGCTCAGTATTGGCAGCTACTAGCTTCTCCAAATGATCCTCGTTCTGGGGACTATGGTTACACCAAATATCAGATGAAACACTTTGGTGCCAATCAAGGTGCTGCAGTTTATAACTCTCTAGATGATGCTGCTCACCGCAATGTTTCTATCAGGTTACTGTCTCACTCAGGAGTATATCCACAATTTACAGAAGAACCATCCAATCTTGCTTCTGGAAGGCCTAATGTTAAGAATGTGACCTTGCTACTAAAGGATTGGTGGGGTTCAGGCATTGTCCATTCCAAAGTTTGGATATCTGATAGTAAGGACTTGTATATTGGATCTGCTAACAATGATTGGAAATCTCTTACACAGGTTAAGGAAGTTGGAATTTATCTTGCTGATTGTCCACAAATAGCTAAGAAGGTTGAGGTCTACTTTAACAATTTATGGAAACTTGCATCTCTTAATTCCTCAGCTTACACAAAAACAGTGTTAGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCGCATTTCGTTGATTCAAGACAGAGATGCAAGTCTCCTCTTCCGCGATATCTACATATCCCTCATGTTACAGGGTATCCTATTCTGTCTGACCCTGATATGTTTGAGGTTCCTATTCAAACTCCTGAGAGTAACTCTTCAACAACTCATTCCGAATTCAACTATCTCTCCTTCGCTCCTCCGGAGCTATCATTTGGAAAATACCAGACCGATGAGCAAGCATGGATTGACACAATAAAATCGGTTGGAAAGAGGGGAACAGTTAGAATCAGCACCATGGACTGGCTAGGTCAGTCACAATACACAGACCAAACAATTTACTGGTCATCCATTTCCTCTGCTATATCAGAGGTTGTGTTTTCCAAGCATGCAACAGTGAAGTTATTGGTGGCATATTGGGCACACTTCATAGATAACACAGATGTGTACCTGAAGTCTCTCCTCCACTCCAACATTCTCTGCGCTTCCTCAAAATACAACAACTGCACTAGTAAAGTTGAGATCAAATATTATCTGGTTCCAGGTTTCAACAAGACAGGACCTGCCAAACATGATGGAGCTAGTACCAGAAATATATACCCTGGTTTTACAAGAGTGAACCATGGAAAATATGCAGTTAGTGATGTAAGGGCTCACATAGGGACTAGCAATCTTGTATGGGACTACTTCTACACAACAGCAGGGATCAGCTTTGGGACATACAACACTGCCATTGTCTCTCAACTTAAGGAAATTTTCGATGCCGACTGGAACTCACCCTATGCTGTTCCAGTTGAACAGGAGAAGGCTCATGCTTGTTCCCTCTAA 1566 0.4183 MRHSTTLIISVLYFVFVIFNNVCECHKTTTSSSSSNPKCKAWLVQSIPTDMPHLSHVPGVLSTGDVLRWLAENSTKKLDVIAQYWQLLASPNDPRSGDYGYTKYQMKHFGANQGAAVYNSLDDAAHRNVSIRLLSHSGVYPQFTEEPSNLASGRPNVKNVTLLLKDWWGSGIVHSKVWISDSKDLYIGSANNDWKSLTQVKEVGIYLADCPQIAKKVEVYFNNLWKLASLNSSAYTKTVLDQQWQVERKVPCWSHFVDSRQRCKSPLPRYLHIPHVTGYPILSDPDMFEVPIQTPESNSSTTHSEFNYLSFAPPELSFGKYQTDEQAWIDTIKSVGKRGTVRISTMDWLGQSQYTDQTIYWSSISSAISEVVFSKHATVKLLVAYWAHFIDNTDVYLKSLLHSNILCASSKYNNCTSKVEIKYYLVPGFNKTGPAKHDGASTRNIYPGFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGISFGTYNTAIVSQLKEIFDADWNSPYAVPVEQEKAHACSL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1112 521 Pfam PLD-like domain 112 225 IPR025202 -
Lan3g1112 521 Gene3D Endonuclease Chain A 62 229 - -
Lan3g1112 521 SMART pld_4 169 196 IPR001736 GO:0003824
Lan3g1112 521 SMART pld_4 449 475 IPR001736 GO:0003824
Lan3g1112 521 CDD PLDc_vPLD3_4_5_like_1 43 210 - -
Lan3g1112 521 PANTHER GM01519P-RELATED 15 514 - -
Lan3g1112 521 CDD PLDc_vPLD3_4_5_like_2 308 504 - -
Lan3g1112 521 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 169 196 IPR001736 GO:0003824
Lan3g1112 521 SUPERFAMILY Phospholipase D/nuclease 114 227 - -
Lan3g1112 521 PANTHER PHOSPHOLIPASE D - RELATED 15 514 - -
Lan3g1112 521 SUPERFAMILY Phospholipase D/nuclease 321 513 - -
Lan3g1112 521 Gene3D Endonuclease Chain A 296 506 - -
Lan3g1112 521 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 449 475 IPR001736 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1112 K16860 - gmx:100778897 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1112 3 23472550 23476679 Lan3g1112 3 23472550 23476679 ECH