Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1090 ATGGGTTGGAGATATAAAACTGGTTTATTCCTTATGGCCACTGTTGTTATTATTTGGGTAACTTCTGCAGAAGTTACTCAGGACATTTTTACAGATTATAAGCAGCCATTTGCGGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGATTGGTTTCGTAACTTTCTTAAACGCCGGTCTTCCAAAGGTGGTAAAACTGCAGTAAGCATGGATGAGTTTTCCGTCAGTATCAGTTCTCTCAGCGGTAATGGAGTGCAGAAAAATCTTGAATTGGAACTGGGAAGTGTGATTCGAAAAGATAGCGATTTAGACCTTCCAGCTCTTGCGGAATTAAAGCCATTGGTTGCTAAATATAATGACAATAGTAATGTGCTAAAGGTAGAGAGAAAACTTACTGGCCGGGAAATTGCCACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGCACAACAGTATTATCATCTACTTCAGGACTTTTCACTCTTTTCATCGGCGCATTTCTTGGCCAAGACACTTTAAATGTACCAAAAATAGCTGCTGTCTTTGTCAGCATAACTGGGGTTGCCATGACAACTCTGGGGAAAACTTGGGCTTCGGATGAGTCAGAATTAAGTGCTGTCAATGGAAATCACTCTCTTGTTGGAGATCTCTTTGGCATTCTCTCGGCTATATCATATGGTCTATTTACAGTTCTTCTCAAAAAGTTTTCCGGTGAAGAAGGAGAAAAGGCTGATGTACAAAAGCTGTTTGGGTATGTTGGATTGTTCACACTAGTAGCACTATGGTGGCTTGTCTGGCCATTGATGGCCTTGGGAATTGAGCCGAAGTTTACGATACCCCACTCTGCTAAAATGGACGAAGTGGTTCTCGCCAATGGAATAGTTGGAAGCGTAGTGTCAGACTATTTCTGGGCACTTTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGTTTGTCACTCACCATTCCTCTTGCTATGGTGGCTGACATGGTGATCCATGGGCGGCATTATTCGGCAATGTACATACTTGGCTCAGTTCAGGTATTTGCAGGCTTTATAATAGCTAATCTTTCAGATTGGTTGACCAAGAAGCTGGGCTTATAG 1182 0.4205 MGWRYKTGLFLMATVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFRNFLKRRSSKGGKTAVSMDEFSVSISSLSGNGVQKNLELELGSVIRKDSDLDLPALAELKPLVAKYNDNSNVLKVERKLTGREIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFLGQDTLNVPKIAAVFVSITGVAMTTLGKTWASDESELSAVNGNHSLVGDLFGILSAISYGLFTVLLKKFSGEEGEKADVQKLFGYVGLFTLVALWWLVWPLMALGIEPKFTIPHSAKMDEVVLANGIVGSVVSDYFWALCVVWTTPLVATLGLSLTIPLAMVADMVIHGRHYSAMYILGSVQVFAGFIIANLSDWLTKKLGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1090 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 219 - -
Lan3g1090 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Lan3g1090 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 280 386 - -
Lan3g1090 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
Lan3g1090 393 Pfam EamA-like transporter family 137 216 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1090 Lan-Chr3 23277809 23283088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1090 K15289 - gmx:100792013 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1043 15 19474269 19479668 Lan3g1090 3 23277809 23283088 LSH
Lan3g1090 3 23277809 23283088 Lan15g1043 15 19474269 19479668 PCT
Lan3g1090 3 23277809 23283088 Lan3g1090 3 23277809 23283088 PCT
Lan15g1043 15 19474269 19479668 Lan3g1090 3 23277809 23283088 PCT