Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1088 ATGCAGAGACGGAGTCCTCCAAAACATAGGCACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCCGCACCTCGAAAATGGGATGGAAAAGATACAGCATGGCCACACAATCATGGAAGTGGTTGGAGTTATTGTGTTACAATACCTTCATGGGTTTTCCTTCCAAAATCAAAGAATTCAGATCCTGTAGTGTTCTACAGGGTTCAAGTTGGTATACAGTCGCCAGAAGGGGTCACAACGCTGCATGGTGTACTAAGAAGGTTCAATGATTTTATTAAGTTATTCACTGATCTTAAAAAGGAGTTTTCCAGGAAAAATATCCCTCCGGCACCACCCAAGGGACTCATGCGACTGAAAAGCCGAACTTTGTTGGAAGAGCGAAGGTGCTCTTTAGAGGAGTGGATGACAAAATTGTTGTCTGATATTGATATATCAAGATGTGCTGCTGTGGCATCATTTCTTGGACTTGAAGCTGCTGCTAGATCTTCATTTCAAGATGCAACCCATCAGAATTCAGAGTCAGATCCTGATTCCAGTAACAGAGCTTATTCAGTGCAGTCACCTCAACATTCGAGCTTATCATTAGTTGCTGGCAGTTCATCTGTTGCCTCAGATTATGGTAGTGATACTGCATATGAGCCATCTGAACTAGGAACTCCAACGATTGGACGGGATGACAATTCTGAAGTTGGCACAGATGATCTAACATTAGATGAAGATATGACAAATCCAATGGAAAAGCTTGTGAAATATGGCATATCAAACATCGATGAGGGTTTGTTTATGAGTCAGACAATTCTAGACCAATTGGAAGGCCTTCCTAGGCATAAAGTAAATGCTAGACGTGACAACTATGTTACAGAGAAGGGAAAAAGTAATGGTAATTCTTATAATGCGTCACTTTTAGCTGATAATTCCTTGGAGCTTTTCTCTGAGCTTGAGCATGCTAAGGCTATTGATCTTGCGCACATTCTTTCAAATGAGAGTTTTGGAAGTGAAGGAAGCTCGATACGTGGTAGTGACATGTCTAATTCTTGGGTTCCGAATTCATCTGGTGGTGGCTCTCCTGGAGGTGCTTTGGTTCCAAGAGCAACATATATTATGAACCACGCAGAGTTGCAGTTTACCGGTGATGCTCAAGTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTTAACTATGCAGCGAAGGCTAGTCACTTCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTTGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAGCTAACAAACAGAAAAGTAAAGAGAATTTGCAGCAAGCTATTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAAGAACTTCGACGGAAGTCACTGGAAATGGAGATGAAACTAAAGTCCGAAATGGGTGGAATCTCAAGTCAGAATTCCATAACGGAGTCATTGGTTCAGCCAAAAGATGTGTTGCATAATTTAAATGCAAATAAAGAGCAACTGGAAGTTTTGTCAAAACATTATGGAGAGCTAGAAGCAAAGTCCAAAGCAGACATTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAATACACAAAAAGAGTTAAAGAAGGAGCTTAGTGAGTCGGTGAAGGAGATTTGTGAGAGAGAGAAACTTCTTCAACATGAAAGGGAAAAGAGGGTGCAGGCAGAAACTGCTTGGAGAAATTTGGTGCCGAAATGCAGGCTTCTTTTCAACCAGCTCCAAGAGTGCAATGTCAATCTTTCTATTGAAGATGAAGATAGGAAGATCTTGAATTCATCATCATTAACTGATACTTTTAATCAATTAGCACTATCTGATGACCAAATTGACATTTTACTGGAAGAGGTAGAAAACTTACAGGACTATGGAAGTGCTGCTTCCAATGTAGATAAAACGGATGACATAAAATGCGGTGGAATCTGTGATGATGATTTGACAAAGATCATAGCAGATCTGTTCATCGACAATGTTAGATTGAGAAAACAGACGAACCATGTTACCCGACATGCTCTAAAAACTTACATGACAGCAAGTGATGATCCTCCTTGA 2124 0.4063 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWDGKDTAWPHNHGSGWSYCVTIPSWVFLPKSKNSDPVVFYRVQVGIQSPEGVTTLHGVLRRFNDFIKLFTDLKKEFSRKNIPPAPPKGLMRLKSRTLLEERRCSLEEWMTKLLSDIDISRCAAVASFLGLEAAARSSFQDATHQNSESDPDSSNRAYSVQSPQHSSLSLVAGSSSVASDYGSDTAYEPSELGTPTIGRDDNSEVGTDDLTLDEDMTNPMEKLVKYGISNIDEGLFMSQTILDQLEGLPRHKVNARRDNYVTEKGKSNGNSYNASLLADNSLELFSELEHAKAIDLAHILSNESFGSEGSSIRGSDMSNSWVPNSSGGGSPGGALVPRATYIMNHAELQFTGDAQVVLPLDQRNKLNRILLTMQRRLVTSKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELEANKQKSKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSEMGGISSQNSITESLVQPKDVLHNLNANKEQLEVLSKHYGELEAKSKADIKVLVKEVKSLRNTQKELKKELSESVKEICEREKLLQHEREKRVQAETAWRNLVPKCRLLFNQLQECNVNLSIEDEDRKILNSSSLTDTFNQLALSDDQIDILLEEVENLQDYGSAASNVDKTDDIKCGGICDDDLTKIIADLFIDNVRLRKQTNHVTRHALKTYMTASDDPP* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1088 707 Coils Coil 535 562 - -
Lan3g1088 707 MobiDBLite consensus disorder prediction 168 211 - -
Lan3g1088 707 MobiDBLite consensus disorder prediction 1 25 - -
Lan3g1088 707 Coils Coil 426 453 - -
Lan3g1088 707 Gene3D - 47 184 IPR036871 GO:0035091
Lan3g1088 707 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 704 - -
Lan3g1088 707 SUPERFAMILY PX domain 41 160 IPR036871 GO:0035091
Lan3g1088 707 SMART PX_2 48 160 IPR001683 GO:0035091
Lan3g1088 707 MobiDBLite consensus disorder prediction 168 244 - -
Lan3g1088 707 Pfam PX domain 87 157 IPR001683 GO:0035091
Lan3g1088 707 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 704 IPR044588 GO:0015031
Lan3g1088 707 Coils Coil 510 530 - -
Lan3g1088 707 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1088 Lan-Chr3 23255916 23262463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1088 - - gmx:100792151 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1088 3 23255916 23262463 Lan3g1088 3 23255916 23262463 ECH
Lan14g0813 14 14951687 14957733 Lan3g1088 3 23255916 23262463 LSH