Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1074 ATGCGAGATTTTTGTGTCCCCATTCCTTTTCTTAATCAATATGCTCCACCTTGGCTATGTCAAATTCTCTCTTGCATGGGAGGTTGTCTTGGATGCTTCACAAAACCTCGTGTAATTATTTCAACGGACGAGGCATCTAAGGGACTTAGACCTGAAGGCCAAGCAGTGAGGAAAGACAACAGGTCTGAAGATTTATGGTGCAGCAGCACCTCTGAAATGGACCGTTACGTAGCTGAGTCCCAGAGAAGCTTCTCATCAGTTGGCATATCAAGTCATCCTTCTGATCCTCAAAGCAGTGTTGACGTTCAGACTGATCATCCTGAATTTATCAATCATGGTCTTCTCTGGAACCAGATAAGGCAACAGTGGGTTGGACATAGAAAGCCTGAGAGTCAGAAGAAACACCTTGGAGAACCCAGAATAAGTTGGGATGCCACATATGAGACTCTAGTTGGGAGCAACATGCGTTTTCCTAAGCCCATTCCTCTGGCAGAAATGGTTGAGTTTCTTGTTGATATTTGGGAGCTAGAGGGTTTGTATGACTGA 546 0.4469 MRDFCVPIPFLNQYAPPWLCQILSCMGGCLGCFTKPRVIISTDEASKGLRPEGQAVRKDNRSEDLWCSSTSEMDRYVAESQRSFSSVGISSHPSDPQSSVDVQTDHPEFINHGLLWNQIRQQWVGHRKPESQKKHLGEPRISWDATYETLVGSNMRFPKPIPLAEMVEFLVDIWELEGLYD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1074 181 Pfam Protein of unknown function (DUF4050) 70 139 IPR025124 -
Lan3g1074 181 Pfam Protein of unknown function (DUF4050) 140 181 IPR025124 -
Lan3g1074 181 PANTHER DUF4050 FAMILY PROTEIN 13 181 - -
Lan3g1074 181 PANTHER OS07G0479600 PROTEIN 13 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1074 Lan-Chr3 23052362 23055888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1074 - - aprc:113865954 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1074 3 23052362 23055888 Lan3g1074 3 23052362 23055888 ECH
Lan1g0228 1 1649953 1652841 Lan3g1074 3 23052362 23055888 ECH
Lan6g1773 6 29002582 29007619 Lan3g1074 3 23052362 23055888 LSH
Lan14g0807 14 14913925 14917115 Lan3g1074 3 23052362 23055888 LSH