Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1066 ATGGAAGCTACTGGTGGAATGGTTGCTGGTTCTCATAAACGGAACGAGCTTGTTCGAATTCGTCACGATTCTTCTGAATCTGGGCCTAAACCGTTGAAAAATTTGAATGGTCAAATCTGTCAAATATGTGGTGATAGTGTTGGATTAACTGCCACTGGTGATGTGTTTGTTGCTTGCAATGAGTGTGCCTTCCCGGTTTGTCGTCCTTGTTATGAATATGAGCGAAAGGATGGCAACCAGGCTTGTCCTCAGTGTAAGACTAGATACAAAAGGCATAGAGGGAGTCCGCGAGTGGACGGAGATGAGGATGAGGATGATGGTGATGATCTGGAGAATGAGTTCAGTCATGGCCAAGGAAATCCTTCCAAGGCAAGGACACAGTGGGACGAAGATGCTGACCTCTCTTCGTCTTCTAGACGTGATCCTCGACAACCAATTCCCCTTCTCACCAATGGCCAGCCGATGTCTGGTGAGATTCAAACACCCGATACTCAATCCGTGCGAACTACATCTGGTCCTTTGGGTCCATCTGAAAAGCTCCACTCACTCCCCTATATTGATCCAAGGCAACCAGTTCCAGTAAGAATTGTTGATCCATCAAAGGACTTGAATTCTTATGGTCTGGGAAATGTTGATTGGAAAGAACGGGTTGAAGGTTGGAAACTCAAGCAGGAGAAAAATGTGGTACAAATGACTGGTAGATACAGTGAAGGAAAAGGTGGAGACATTGAAGGGACTGGTTCTAATGGAGAAGAACTCCAAATGGTGGATGATGCTCGACAGCCTTTGAGTCGTGTGGTGCCTCTTCCTTCATCCCAGATCACCCCTTACCGTGTTGTTATCATACTCCGGCTGATTATTCTTTGCTTCTTCTTACAATACCGTGTAACTCACCCTGTGAAAGATGCATACCCACTGTGGTTGACATCAGTTATTTGTGAGATTTGGTTTGCCTTATCCTGGCTCTTGGATCAGTTTCCAAAATGGTATCCCGTTAATCGCGAGACTTATCTTGACAGGCTTGCTTTAAGATATGATCGTGAAGGAGAACCATCACAGTTGGCTCCTGTTGATGTTTTTGTTAGTACAGTGGATCCTCTCAAAGAGCCTCCTCTTGTAACTGCAAACACAGTTTTGTCTATACTTTCTGTTGATTACCCTGTCGACAAGGTGTCCTGCTATGTATCAGATGATGGTTCAGCTATGTTGACCTTTGAATCCCTGTCAGAAACAGCTGAGTTTGCAAAGAAGTGGGTGCCCTTTTGCAAGAAGCACAATATTGAGCCAAGAGCACCTGAGTTTTATTTTGCCCAGAAGATTGATTACTTGAAGGACAAGATTCAACCTTCTTTTGTGAAGGAACGACGGACAATGAAGAGAGAATATGAAGAATTCAAAGTACGGATCAATGCCCTTGTAGCCAAAGCACAGAAGATGCCAGAAGAAGGATGGACAATGCAGGATGGAACTGCTTGGCCAGGAAATAATCCTCGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGCCATAGTGGAGGGCTTGATACAGATGGAAATGAGCTACCTAGACTTGTTTACGTTTCTCGTGAGAAGCGACCGGGCTTCCAACATCACAAGAAGGCCGGAGCTATGAATGCCTTGATTCGAGTATCTGCTGTCTTGACCAATGGTGCTTATCTTTTGAACGTCGATTGTGATCACTATTTCAATAATAGCAAAGCTGTTAAAGAAGCCATGTGTTTCATGATGGATCCTGCTTTTGGAAAGAAGACATGCTACGTACAATTCCCTCAGAGGTTCGATGGCATTGACTTGCACGATCGATATGCCAATCGCAATATTGTGTTCTTCGATATCAACTTGAAAGGTCTTGATGGTATTCAGGGCCCAGTCTATGTGGGAACTGGTTGCTGTTTCAATAGGCAGGCTTTGTATGGTTATGATCCTGTTTTGACTGAGGAAGATTTGGAGCCTAACATTATTGTTAAGAGTTGTTGTGGTTCTAGAAAGAAGGGAAGGGGTGGCAAGAAGTACAATGACAAGAAGAGGGGAGTTAAAAGAACTGAATCAACCATTCCAATCTTTAATATGGAAGACATAGAGGAGGGTGTTGAAGGGTATGATGAAGAAAGGTCACTTCTTATGTCTCAAAAGCGTTTAGAGAAGCGTTTCGGTCAGTCTCCAGTTTTTATTGCTGCTACCTTTATGGAACAGGGTGGCATTCCACCTTCAACCAATCCTGCAACTCTTCTTAAGGAAGCAATCCATGTTATCAGCTGTGGCTATGAAGACAAGACAGAATGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTTACTGAAGATATCTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGCATGCCACCTCGCCCAGCATTTAAGGGTTCTGCTCCCATCAATCTTTCTGACCGTCTCAATCAGGTGCTTCGGTGGGCCTTGGGTTCAATTGAGATCTTCCTGAGCAGGCATTGTCCCCTGTGGTATGGCTACAAGGGGAAGTTGAGGTCTCTGCAGAGACTTGCTTATATTAACACCATTGTCTACCCCCTTACCTCAATCCCATTGATTGCTTACTGTGTGCTTCCTGCATTTTGTCTCATCACAAATAAATTTATTATTCCTGAGATAAGTAACATTGCCAGCATGTGGTTCATTCTTCTCTTCGTCTCCATTTTTACCACTTCAATTCTCGAGCTTAGGTGGAGTGGAGTCAGTATAGAAGACTGGTGGAGGAATGAACAGTTCTGGGTTATTGGTGGGACGTCCGCTCATCTTTTTGCCGTGTTCCAAGGGTTGCTGAAAGTTCTTGCTGGGATCGATACAAATTTTACTGTTACTTCGAAGGCATCTGATGAAGATGGGGACTTTACAGAGCTCTATGTGTTTAAATGGACATCACTTCTTATCCCTCCTACTACAGTCCTTATTGTGAATTTGATAGGGATTGTGGCTGGTGTGTCCATTGCCATAAACAGTGGTTACCAGTCTTGGGGTCCACTATTTGGTAAGTTGTTCTTTGCCATCTGGGTCATTGCTCATCTATACCCATTCTTGAAGGGTCTGTTGGGTAGGCAAAACCGAACCCCGACCATTGTTATCGTTTGGTCCTTTCTCCTTGCTTCTATATTCTCCTTGCTATGGGTCAGGATTGACCCCTTCACCAAAGATACAAACGCATCCAATGGTCAATGTGGCATCAACTGTTAG 3246 0.4415 MEATGGMVAGSHKRNELVRIRHDSSESGPKPLKNLNGQICQICGDSVGLTATGDVFVACNECAFPVCRPCYEYERKDGNQACPQCKTRYKRHRGSPRVDGDEDEDDGDDLENEFSHGQGNPSKARTQWDEDADLSSSSRRDPRQPIPLLTNGQPMSGEIQTPDTQSVRTTSGPLGPSEKLHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNVVQMTGRYSEGKGGDIEGTGSNGEELQMVDDARQPLSRVVPLPSSQITPYRVVIILRLIILCFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWYPVNRETYLDRLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGSAMLTFESLSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRTMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTAWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAVKEAMCFMMDPAFGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGRGGKKYNDKKRGVKRTESTIPIFNMEDIEEGVEGYDEERSLLMSQKRLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYKGKLRSLQRLAYINTIVYPLTSIPLIAYCVLPAFCLITNKFIIPEISNIASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYVFKWTSLLIPPTTVLIVNLIGIVAGVSIAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSFLLASIFSLLWVRIDPFTKDTNASNGQCGINC* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1066 1081 Coils Coil 455 475 - -
Lan3g1066 1081 Pfam Zinc-binding RING-finger 30 106 IPR027934 -
Lan3g1066 1081 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 22 1081 - -
Lan3g1066 1081 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 657 IPR029044 -
Lan3g1066 1081 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Lan3g1066 1081 CDD mRING-HC-C4C4_CesA_plant 38 88 - -
Lan3g1066 1081 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 657 IPR029044 -
Lan3g1066 1081 SUPERFAMILY RING/U-box 25 108 - -
Lan3g1066 1081 MobiDBLite consensus disorder prediction 1 31 - -
Lan3g1066 1081 MobiDBLite consensus disorder prediction 89 186 - -
Lan3g1066 1081 ProSiteProfiles Zinc finger RING-type profile. 40 86 IPR001841 -
Lan3g1066 1081 PANTHER CELLULOSE SYNTHASE 22 1081 - -
Lan3g1066 1081 MobiDBLite consensus disorder prediction 139 176 - -
Lan3g1066 1081 MobiDBLite consensus disorder prediction 14 28 - -
Lan3g1066 1081 Pfam Cellulose synthase 357 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1066 Lan-Chr3 22950515 22959586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1066 1 1079 Glycosyltransferase AT4G32410 86.993 0.0 1921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1066 K10999 - gmx:100798193 2055.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1066 3 22950515 22959586 Lan3g1066 3 22950515 22959586 ECH
Lan15g1025 15 19360617 19367356 Lan3g1066 3 22950515 22959586 LSH