Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1033 ATGGGTTACAAAAGCTCTTCCCTTTCATGCTTGGCACTTTTGCTAGCTTTCTCTTCATGCATTCATGCTTTTGATGTCTTGAAAGTTTTTGGGTCAGACCCAGAATTCACCCAGTTCATCAAAGCCCTAACCGAAACCAAGCTTGTAGATGAAATAAACAAGCGCAGCACCATCACAGTCTTGTCCCTTAACAATGAAGCAATGAGTTCCCTTAGTGGGAAATCAACTTCAACACTCAAGGACATTCTCAGCACTCACCTTCTCCTTGATTTCTATGATGATAAAGCTCTCTTCTATGCTAACACCAACCACACCAAGATGCCCACACTCTTTCAATCTTCTGGTAAAGCTGTGAATGATCAAGGTTACATTTATGTTTCCCTTATAAACGAGGGAGAGATAGCTTTTGCTTCTGCTGTTAACAATGCACCTTACAAGTCCTTGCTTGTGAAAACTGTTGGATCGGAACCCAGCACCATTTCTGTTCTTGAGGTTTCTGCACCTATTGTTGCACCAGGAATTGAGAGCACAGTTACACCAGTTGTGTCTATAGCCCCAGTTCCTTCTGCACCAAAGGCAACTGCAACAGCAAAAGCACCAGCAACAGGAACAGAAAAAGCACCAGCGACATCAAATGCAACAGCAAAAGCACCAGTTGCTACTTCTAAACAGGGACCAGCACCTGCAGAAGTATCCGTCATTGCTGCTCCAGCACCTTCTAACATAGCTGAGCCACCAGTGGATGCCGCTGCACCAAGCCCAGTTGCTGAAGAAGCTGCTGCTCCAGCACCTCATAGCAGCGCTTCTAGCACCCAGATTGGTTTGGTTGGTGCAGTTATGGCCATGGCTTCACTCTTTGTTTCTTTGTAA 870 0.454 MGYKSSSLSCLALLLAFSSCIHAFDVLKVFGSDPEFTQFIKALTETKLVDEINKRSTITVLSLNNEAMSSLSGKSTSTLKDILSTHLLLDFYDDKALFYANTNHTKMPTLFQSSGKAVNDQGYIYVSLINEGEIAFASAVNNAPYKSLLVKTVGSEPSTISVLEVSAPIVAPGIESTVTPVVSIAPVPSAPKATATAKAPATGTEKAPATSNATAKAPVATSKQGPAPAEVSVIAAPAPSNIAEPPVDAAAPSPVAEEAAAPAPHSSASSTQIGLVGAVMAMASLFVSL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1033 289 MobiDBLite consensus disorder prediction 195 226 - -
Lan3g1033 289 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 281 IPR033254 -
Lan3g1033 289 MobiDBLite consensus disorder prediction 244 269 - -
Lan3g1033 289 Pfam Fasciclin domain 34 113 IPR000782 -
Lan3g1033 289 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 281 - -
Lan3g1033 289 Gene3D FAS1 domain 23 175 IPR036378 -
Lan3g1033 289 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Lan3g1033 289 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lan3g1033 289 MobiDBLite consensus disorder prediction 205 219 - -
Lan3g1033 289 SUPERFAMILY FAS1 domain 30 117 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1033 Lan-Chr3 22686167 22700280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1033 - - lang:109343689 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0987 10 14916813 14917930 Lan3g1033 3 22686167 22700280 LSH