Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0996 ATGTGGACGCGCCTCTCGTTACTCTTCTTCTTCTTCTTCACAATGCCTTTTTATTATGCAATGCCGGTTCAGACCACTTTTCCTGCAAAACTACTTCACCGGTTTTCTGATCATTTTAAACCGGTTCGGGTTCAATCCGGTTCATTTCTGAACCGGAAGAAAACCATGAACTACTATCACTTGCTTCTTACTAATGATAAGATCAAGCTTGCAAATCGACACCAGCTTCTTTTTCCTTCTCGCGGTAGTAAAACGATGTCGTTTGGGAATGACTTTGCATGGTTGCATTATACGTGGATTGATATAGGGACACCTAGTACTTCATTTCTTGTGGCGTTAGATGCAGGGAGTGATCTTCTTTGGGTTCCATGTGATTGCATAAAGTGTGCTCCTTTATCTGCAACTTACTATTCCAATTTGGATAGAGATCTGAATGAGTATAGTCCTTCTCGTTCGATATCAAGTAAGCATATATCATGCAGCCATCAGTTATGTGATTTGGGTTCAACTTGTAAAAGTTCCAAGCAGCAGTGTCCATACACAATGAATTACTTATCAGAGAATACATCGAGCTCTGGCTTGTTGGTTGAAGACATATTGCATCTTCAGTCAGGTGGCGAGGGCGTATCAAACTCTTCTGTTCAGGCTTCCGTTGTTATCGGTTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGACGGTGTCATGGGTATGGGACCTGGGGATAGTTCAGTTCCTAGTCTTCTTGCTAAATCTGGATTAATCCGCAATTCTTTCTCCTTGTGCTTTAATGAAGATGATTCTGGTAGAATATTTTTTGGGGACCAGGGATCAACCATCCAACAGTCCACTTCATTCTTACCATTGGATGGAATATATTCTACCTACATTATTGGAGTGGACGCATGTTGTGTTGGGAAATCTTGCCTTAAAATGACGAGTTTTAAAGCGCAGGTTGATAGCGGGACATCATTTACATTTCTTCCTGGGCATGTATATGAAGCAATAGCTGAAGAGTTTGATCAACAAGTAAATGCTTCAAGATCTACCTTTGAAGAATCTCCTTGGGAGTATTGTTATACTTCCAGTTCACAAGAGTTGCCAAAGGTCCCCACCTTGACACTCATGTTCCAACAGAATAACAGTTTTGTGGTCTTTAATCCTGTGTTTGTATTCTATGGGAATCAGGGAATCACTGGATTTTGTTTAGCCATACAGCCAGATGATGGGGATATGGGAACAATTGGACAGAACTTCATGACAGGATACCGGTTGGTATTTGATAGGGAAAACAAGAAGCTAGCGTGGTCGAGTTCAAATTGTGAGGATCTCACTCTAGGTAAGAGTATGCCCCAGTCTCCTCGGAACGAGACATTGACAAACCCATTGCCTACAGATGAGCAACAGAGAGTGAACGGGCATGCAGTTGCTCCCTCCGTTGCCAGAAGAGCTCCGAACAATCCTTCGGCTGCTTCATCTAGGATGATTTCATGCTGCCAGAACTGGTATTGTTATTTGTTTCTTCTATTTCAACTTGTTTCAGCTTTTTCCTGA 1566 0.4221 MWTRLSLLFFFFFTMPFYYAMPVQTTFPAKLLHRFSDHFKPVRVQSGSFLNRKKTMNYYHLLLTNDKIKLANRHQLLFPSRGSKTMSFGNDFAWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIKCAPLSATYYSNLDRDLNEYSPSRSISSKHISCSHQLCDLGSTCKSSKQQCPYTMNYLSENTSSSGLLVEDILHLQSGGEGVSNSSVQASVVIGCGMKQSGGYLDGVAPDGVMGMGPGDSSVPSLLAKSGLIRNSFSLCFNEDDSGRIFFGDQGSTIQQSTSFLPLDGIYSTYIIGVDACCVGKSCLKMTSFKAQVDSGTSFTFLPGHVYEAIAEEFDQQVNASRSTFEESPWEYCYTSSSQELPKVPTLTLMFQQNNSFVVFNPVFVFYGNQGITGFCLAIQPDDGDMGTIGQNFMTGYRLVFDRENKKLAWSSSNCEDLTLGKSMPQSPRNETLTNPLPTDEQQRVNGHAVAPSVARRAPNNPSAASSRMISCCQNWYCYLFLLFQLVSAFS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0996 521 Pfam Xylanase inhibitor C-terminal 319 441 IPR032799 -
Lan3g0996 521 Gene3D Acid Proteases 77 279 IPR021109 -
Lan3g0996 521 MobiDBLite consensus disorder prediction 450 476 - -
Lan3g0996 521 Pfam Xylanase inhibitor N-terminal 97 279 IPR032861 -
Lan3g0996 521 Gene3D Acid Proteases 280 447 IPR021109 -
Lan3g0996 521 PRINTS Pepsin (A1) aspartic protease family signature 102 122 IPR001461 GO:0004190|GO:0006508
Lan3g0996 521 PRINTS Pepsin (A1) aspartic protease family signature 321 332 IPR001461 GO:0004190|GO:0006508
Lan3g0996 521 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Lan3g0996 521 PANTHER ASPARTYL PROTEASES 12 462 IPR001461 GO:0004190|GO:0006508
Lan3g0996 521 MobiDBLite consensus disorder prediction 450 472 - -
Lan3g0996 521 SUPERFAMILY Acid proteases 92 446 IPR021109 -
Lan3g0996 521 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 12 462 - -
Lan3g0996 521 ProSiteProfiles Peptidase family A1 domain profile. 96 441 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0996 Lan-Chr3 21698819 21704246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0996 89 448 Miscellaneous Gene Families AT1G44130 27.202 2.74e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0996 - - gmx:100782209 804.668