Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0952 ATGGCTGCTTCGGAGGAGAATAGTGCACTGTTCCCAATTTTCATATTGACAATAATGGCCATCCCCATTGTGCCATATACAATCACAAAGTTATACCGTGCTGTCACTAAAAAATCAAAGAGCATTCACTGTCACTGCTCTGAATGTACGCGATCGGGGAAGTACCATATATCGATATCCAAGAGGATTTCGAATGTTTTCACATGTAGTAACTTCACACTGTTACTGCTTTGGGTGGTCATGATCATTATGGTTTATTACATCAAGAATTTAAGTAGTGAGGTTCAAGCTTTTGATCCATTTACTATTCTTGGATTGGAACCTGGAGCACTAGAGTCTGAAATAAAGAAAAAATACAGGAGACTTTCTATTCAATACCATCCAGATAAAAATCCAGATCCAGAGGCAAATAAATACTTCGTTGAGTACATTGCCAAGGCATATCAAGCTCTGACAGATCCAATATCTCGTGAAAATTATGAAAAATATGGCCATCCTGATGGGAGGCAGGGATTTCAAATCGGTATTGCTCTCCCTCAATTTTTGCTAAATAGTGATGGGGCATCTAGTGGAGTACTTCTAATTTGGATTGTTGGTGTGTGTATTCTCTTGCCATTGATTGCTGCTGCTGTTTATCTGTCAAGATCATCAAAGTATAGTGGCAATCATGTGATGCAAGAAACCCTTTCCAATTACTATAACCTCATGAAGCCCTCTTTGGCCCCCAGCAAAGTAATGGATGTCTTCATAAAGGCCGCTGAATATATGGAAATTCCAGTTCGTAGGACTGACGATGAACCTCTTCAGGAGCTTTTTATGTTATTAAGGAGTGAGTTGAATCTTGATCTCAAGAACATTAAGAAGGAGCAGGCTAAGTTTTGGAAGCAGCATGCTGCGCTGGTTAAGGCGGAGCTGTTAGTTCACACTCAGTTGGCCCGTGAGTTTGCAGCTTTGTCTCCATCTTTACAAAGTGATTTCGGACAAATTTTAGAAATAGCACCTCGCCTTCTTGAAGTATTAATGAAGATGGCAGTTATACCACGCAATAATCAGGGGCATGGGTGGCTGAGGCCTGCCATTGGTGTTGTTGAGCTTTCTCAAAGTATCATCCAGGCTGTTCCTTTCAGCGCTAGAAAGAGTACCGGTGTACTATCTGATGGGATTGCACCATTTCTGCAGCTGCCACATATTAACGAGACTGTCATTAAGAAGGTGGCCCCTAAGAAGGTGAAAACAGTTAAGGAACTTCTTGAGATGGACTCACAGAAGAGAGCTGACTTGCTTATCCAAACAGCTGAGTTGTCTTCTGCTGAAGTACAAGACATTGAGGCGGTACTAGATATGATGCCTTCCTTGACATTCGATGTAACTTGCGAGACTGAAGGCGAAGAGGGTATTCAAGAGGGTGACATTGTCACTCTCAATGCATGGGTAAATGTCAAACGAGGTAATGGGCTGATCGGTGCCATTCCACATGCTCCCCACTACCCATTTCACAAGGAGGAAAATTTCTGGTTTTTGCTTGCGAATTCTGCTTCGAATAATGTCTGGTTATCTCAGAAGGTTAGTTTCCTGGATGAAGCTGCGGCTGTATCTGCTGCTTCTAATGCAATTGAGGAATCCATGGAGGGGTCAGGAAAAAGTGGGGAGGAGACCAGTAGAGCAGTTGCAGAAGCTGTCGGAAAGGTTAAGAGCGGTTCCAGATTTGTATCGGGAAAGTTTCAGGCCCCATCTGCGGGTATCTACAATTTGACTTGCTATGTTTTGTGCGACTCTTGGTTGGGCTGTGACAGAAAGACAAATCTAAAGCTCAAAATTTTGAAACGGACTCGGGCTGGCACCAGGGCTGCTGCTTTCGACGATGAAGGACCTCTGGTGGAAGATGACGTTGACGAGGATGAGGATGATGTGGATGAAGAGTATGATGAAGAGTATGAGAGTGAGTACAGTGAAGATGAAGAAGATGATCAATACTCAAAAAATTCTAGCTCTGATGAAGAGTAA 2004 0.4291 MAASEENSALFPIFILTIMAIPIVPYTITKLYRAVTKKSKSIHCHCSECTRSGKYHISISKRISNVFTCSNFTLLLLWVVMIIMVYYIKNLSSEVQAFDPFTILGLEPGALESEIKKKYRRLSIQYHPDKNPDPEANKYFVEYIAKAYQALTDPISRENYEKYGHPDGRQGFQIGIALPQFLLNSDGASSGVLLIWIVGVCILLPLIAAAVYLSRSSKYSGNHVMQETLSNYYNLMKPSLAPSKVMDVFIKAAEYMEIPVRRTDDEPLQELFMLLRSELNLDLKNIKKEQAKFWKQHAALVKAELLVHTQLAREFAALSPSLQSDFGQILEIAPRLLEVLMKMAVIPRNNQGHGWLRPAIGVVELSQSIIQAVPFSARKSTGVLSDGIAPFLQLPHINETVIKKVAPKKVKTVKELLEMDSQKRADLLIQTAELSSAEVQDIEAVLDMMPSLTFDVTCETEGEEGIQEGDIVTLNAWVNVKRGNGLIGAIPHAPHYPFHKEENFWFLLANSASNNVWLSQKVSFLDEAAAVSAASNAIEESMEGSGKSGEETSRAVAEAVGKVKSGSRFVSGKFQAPSAGIYNLTCYVLCDSWLGCDRKTNLKLKILKRTRAGTRAAAFDDEGPLVEDDVDEDEDDVDEEYDEEYESEYSEDEEDDQYSKNSSSDEE* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0952 667 MobiDBLite consensus disorder prediction 619 667 - -
Lan3g0952 667 Pfam DnaJ domain 99 161 IPR001623 -
Lan3g0952 667 PANTHER SEC63 DOMAIN-CONTAINING 1 661 - -
Lan3g0952 667 SUPERFAMILY Chaperone J-domain 96 187 IPR036869 -
Lan3g0952 667 SMART dnaj_3 98 156 IPR001623 -
Lan3g0952 667 Gene3D - 226 373 - -
Lan3g0952 667 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Lan3g0952 667 Gene3D C2 domain 453 613 IPR035892 -
Lan3g0952 667 Gene3D DnaJ domain 93 173 IPR036869 -
Lan3g0952 667 PRINTS DnaJ domain signature 101 119 IPR001623 -
Lan3g0952 667 PRINTS DnaJ domain signature 119 134 IPR001623 -
Lan3g0952 667 PRINTS DnaJ domain signature 136 156 IPR001623 -
Lan3g0952 667 PRINTS DnaJ domain signature 156 175 IPR001623 -
Lan3g0952 667 SUPERFAMILY Sec63 N-terminal domain-like 244 450 - -
Lan3g0952 667 SMART Sec63_2 209 604 IPR004179 -
Lan3g0952 667 SUPERFAMILY E set domains 455 608 IPR014756 -
Lan3g0952 667 Pfam Sec63 Brl domain 224 602 IPR004179 -
Lan3g0952 667 MobiDBLite consensus disorder prediction 623 667 - -
Lan3g0952 667 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 661 - -
Lan3g0952 667 Gene3D - 389 448 - -
Lan3g0952 667 CDD DnaJ 99 153 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0952 Lan-Chr3 20804162 20811897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0952 K09540 - gmx:100776439 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0204 15 2198711 2206863 Lan3g0952 3 20804162 20811897 LSH
Lan14g0091 14 1219201 1220183 Lan3g0952 3 20804162 20811897 LSH