Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0947 ATGGCTCCAATTCGCTCTAGTGGGTTTATTGATCCCGGTTGGGATCATGGCATTGCACAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAATAGTTAGTGGTGGGATATATAGATTAAAGCAGCATTTAGCCCGGGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCTGAGGAAGTCTACCTAAAAATGAAGGAAAACCTGGAAGGGTGCCGCTCCAGTAAGAAACAAAAACAAGTTGATTCACAAGCATATATGAATTTTCACTCTAATGATGATGAAGACGATGAGGAGCAAGTTGGATGTAGAGGCAAAGGGAAGCAATTGATGGATGATACAAATGTATCTGTAAATTTAACGACTCTTCGGTCATTAGGATATGTTGACCCTGGGTGGGAACATGGTGTTGCTCAGGATGAGAGAAAAAAGAAAGTCAAATGCAATTACTGTGAGAAAGTTGTTAGTGGAGGTATTAATCGGTTTAAACAGCATCTGGCTAGAATTCCAGGAGAAGTAGCACCTTGTAAAAGTGTCCCAGAAGAAGCTTACCTTAAAATAAAAGAGAATATGAAGTGGCATCGCACTGGAAGGAGACATAGACGACCTGAGGTTAAGGAATTGATACCTTTCTATTCAAAGTCGGATAATGAAGATGAAGAGTATGATCAAGGGGAAGATGCTTTGCATCATATGAACAAGGAAACTTTTATTGATGTTGATAAGCGGTCGTCTAAGGATTTAAGAAAAACCCTGAAGGGAATATCACCTAGTACTGGTACTGAACCAGTATTGAGAAGATCAAGATTGGATAACGTTTACCTGAAATTTCCCAACAACCCGGCGCCTCAAACTCACAAACAAGTGAAGGTTAAGACAGGGCCCACTAAGAAATTACGAAAGGAAGTTATTTCTTCGATTTGGAAGTTTTTTTACCATGCAGGAATTCCTTCACAGGCTGCAGACTCCCTATATTTTCATAAAATGCTGGAAGTGGTGGGTCAATATGGACAAGGATTGGTATGCCCACCCAGACAACTTATTTCTGGTCGCTTTCTGCAGGAGGAAATAAATTCCATTCAGAATTACCTTGTTGAATATAAGGCTTTCTGGGCAATTACTGGTTGTTCTATATTGGTAGATAGTTGGATAAATACCCAGGGTAGGACAATTATTAACTTTCTTGTTTCTTGTCCTCATGGTGTATACTTTGTCTCTTCCATTGATGCCACAAATGTAGTAGAAGATGCACCAAATTTATTTAAGCTTTTGGACAAAATAGTGGAAGAAATAGGTGAGGAAAATGTAGTGCAGGTAATCACTGAAAATACTTCCAGCTACAAAGCTGCTGGAAAAATGCTGGAAGAGAAGAGAAGGAATTTATTCTGGACCCCTTGTGCCACTTATTGTACTAATCAAATGCTTGAAGATTTTATGAAGATAAGATGTGTGGGAGAGTGCATGGAAAAGGGCCAGAAAATTACAAAATTAATATATAATCAAACATGGTTGTTAAATCTTATGAAAAGTGAATTTACTCTAGGGCAGGATCTTCTAAAGCCAGCTGGTAGTCGGTGCGCTTCTAACTTTGCTACATTGCAGAGCTTGGTGGATCATCGAGTTGGTCTCAGACAAATGTTTCTATCAAACAAATGGATTTCATCCAGGTTCTCCAGAACAAGTGAGGGAAAAGAGGTGGAAAAAATTGTTTTGAATGTCACATTTTGGAAGAAAATGCAGTATGTTAGGAGGTCAGTAGATCCCATAATGCAAGTGCATGAAAAGGTTTGTAGTGGTGAGAGCTTGTCAATGCCATACATATATAATGATATGTACAGGGCAAAACTTGCCATTAAATCTGTTCATGGTGAAGATGCACGGAAATATGAACCATTCTGGAAGGTGATAGACAGCCATTGGAACTCTTTGTTTTGTCATCCTCTTTTCTTGGCTGCGTACTTCTTAAATCCATCATACAGATATCGTCAGGATTTTGTGCCGCATTCTGAGGTAGTACGAGGGCTCAATGAATGCATTGTTAGGCTGGAGCCAGATAATATGAGACGGATATCTGCATCAATGCAAATTTCTCATTTTAATTCTGCACAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTTGAACCAGCTGCTTGGTGGCAACAACATGGAATAAGTTGCTTAGAGTTGCAAAGAATAGCTGTACGCATATTAAGTCAGACATGCTCATCCTTTGTGTGTGAGCATGGTTGGAGTATATATGATCAGATATACAGCAAAAGACAAAATCGTATATCTCAGAAGAAACTTGATGACATTATCTATGTTCACTACAACTTGCGACTGAGAGAATGCCAATTAAGAAAAAGGTCTAGAGACTCAAAATCAACCTCTGATGACAGTTTTCTTCAAGAGCATTTACTCAGTGATTGGGTACTTGATGCCAATGTACAAAGCTCTGATTGTGAGAAGAACATCCTTTTTGGAGTTGAACAAGATGACGATTATGAAAATGATTCAATTGATTATGAAGATGGAGCTGCAAGGTCCTTGAAAGGATCTCTTGAGCTGGTGACTATGGCCGATGTAGCTGTAGGGTCACAGGATCTGGATCATGTTAACATAGATGCTGCCACTGACAATGAGTCTGATCTGAATTATTTTGATGATGATTTGAGTAATTAA 2706 0.391 MAPIRSSGFIDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSSKKQKQVDSQAYMNFHSNDDEDDEEQVGCRGKGKQLMDDTNVSVNLTTLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKVVSGGINRFKQHLARIPGEVAPCKSVPEEAYLKIKENMKWHRTGRRHRRPEVKELIPFYSKSDNEDEEYDQGEDALHHMNKETFIDVDKRSSKDLRKTLKGISPSTGTEPVLRRSRLDNVYLKFPNNPAPQTHKQVKVKTGPTKKLRKEVISSIWKFFYHAGIPSQAADSLYFHKMLEVVGQYGQGLVCPPRQLISGRFLQEEINSIQNYLVEYKAFWAITGCSILVDSWINTQGRTIINFLVSCPHGVYFVSSIDATNVVEDAPNLFKLLDKIVEEIGEENVVQVITENTSSYKAAGKMLEEKRRNLFWTPCATYCTNQMLEDFMKIRCVGECMEKGQKITKLIYNQTWLLNLMKSEFTLGQDLLKPAGSRCASNFATLQSLVDHRVGLRQMFLSNKWISSRFSRTSEGKEVEKIVLNVTFWKKMQYVRRSVDPIMQVHEKVCSGESLSMPYIYNDMYRAKLAIKSVHGEDARKYEPFWKVIDSHWNSLFCHPLFLAAYFLNPSYRYRQDFVPHSEVVRGLNECIVRLEPDNMRRISASMQISHFNSAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFVCEHGWSIYDQIYSKRQNRISQKKLDDIIYVHYNLRLRECQLRKRSRDSKSTSDDSFLQEHLLSDWVLDANVQSSDCEKNILFGVEQDDDYENDSIDYEDGAARSLKGSLELVTMADVAVGSQDLDHVNIDAATDNESDLNYFDDDLSN* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0947 901 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 45 839 - -
Lan3g0947 901 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 48 - -
Lan3g0947 901 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Lan3g0947 901 SUPERFAMILY Ribonuclease H-like 371 789 IPR012337 -
Lan3g0947 901 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Lan3g0947 901 Pfam Protein of unknown function (DUF 659) 346 497 IPR007021 -
Lan3g0947 901 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Lan3g0947 901 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Lan3g0947 901 Pfam hAT family C-terminal dimerisation region 716 787 IPR008906 GO:0046983
Lan3g0947 901 PANTHER OSJNBA0013A04.12 PROTEIN 11 48 - -
Lan3g0947 901 PANTHER OSJNBA0013A04.12 PROTEIN 45 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0947 Lan-Chr3 20676675 20682991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0947 - - gmx:100814604 1626.68