Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0939 ATGGCAACCTCTTTGATGACAACTCTTCCTCAATTCAATGGCCTTAGACCCAGTTCCTCAGCAACACCGGTGCAAAACTTGGTTGCTGTACAACCCATGAGGCGCAGAGGGAAGGGTGCTTTGAGTGTTCGTTGTGACTTCATTGGTTCTCCAACTAATCTGATTTTAGTGGCTTCTACAAGCATAATGCTGTTTGCTGGAAGATTTGGATTGGCTCCATCAGCAAACAGAAAAGCAACTGCAGGGCTAAAGCTTGAAGTGAGGGACTCAGGGTTGCAGACTGGTGACCCAGCTGGATTCACCCTTGCTGATACATTGGCCTGTGGAACTGTTGGCCACATCATTGGAGTTGGAGTTGTTCTTGGCCTTAAGAACATTGGTGCCATATAA 390 0.4718 MATSLMTTLPQFNGLRPSSSATPVQNLVAVQPMRRRGKGALSVRCDFIGSPTNLILVASTSIMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKNIGAI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0939 129 TIGRFAM PS_I_psaK_plant: photosystem I reaction center PsaK 47 129 IPR017493 -
Lan3g0939 129 Pfam Photosystem I psaG / psaK 52 127 IPR000549 GO:0009522|GO:0015979|GO:0016020
Lan3g0939 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC 1 129 - -
Lan3g0939 129 Gene3D - 46 129 IPR023618 GO:0009522|GO:0015979
Lan3g0939 129 PIRSF PsaK 1 129 IPR016370 -
Lan3g0939 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 1 129 IPR016370 -
Lan3g0939 129 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 97 123 IPR035982 GO:0009522|GO:0015979|GO:0016020
Lan3g0939 129 ProSitePatterns Photosystem I psaG and psaK proteins signature. 99 116 IPR000549 GO:0009522|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0939 Lan-Chr3 20561887 20564137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0939 K02698 - vvi:100261762 219.164