Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0935 ATGGCAAATGAGCAATTGAAGCCTATTGCAACACTTCTTTTAGGGCTAAACTTTTGCATGTATGTCATTGTTTTAGGCATTGGTGCATGGGCTGTTAATAGGGCTATTGATCATGGTTTTGTTATAGGTACAGGATTTGATCTTCCTGCACATTTTTCACCAATATACTTCCCTATGGGAAATGCTGCTACTGGGTTCTTTGTGACATTTGCTTTGATTGCTGGAGTTGTTGGTGCTGGATCAACGATAGCAGGACTCAACCATATCCGCTCGTGGACTTCAGAGAGTTTGCCATCTGCAGCTTCAGTTGCTACCATTGCATGGTCTCTTACACTTCTTGCCATGGGCTTTGCATGCAAAGAGATTGAGCTTAACATCAGAAATGCCCGCTTGAGAACATTGGAGGCTTTTCTTATTATCCTTTCAGCTACTCAGCTTTTCTACATAGGTGCTATTCATGGTGCTGCTGCTTATAGGAGATAA 483 0.4224 MANEQLKPIATLLLGLNFCMYVIVLGIGAWAVNRAIDHGFVIGTGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGAGSTIAGLNHIRSWTSESLPSAASVATIAWSLTLLAMGFACKEIELNIRNARLRTLEAFLIILSATQLFYIGAIHGAAAYRR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0935 160 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 160 IPR008390 -
Lan3g0935 160 Pfam AWPM-19-like family 16 155 IPR008390 -
Lan3g0935 160 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0935 Lan-Chr3 20513046 20514610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0935 1 154 Miscellaneous Gene Families AT5G46530 73.377 5.48e-84 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0935 - - gmx:100527291 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0054 14 800489 802245 Lan3g0935 3 20513046 20514610 LSH